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Os01g0907300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0181) R2 : 0.0183
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.111 (0.0381) R2dN8 : 0.0237 R2N8 : 0.0183
σ : 0.34
deviance : 53.21
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.58 0.213 10.3 0.966 0.305 -0.354 -0.305 2.48 0.228 19.4 0.2027 1651 -- --
21.33 0.215 10.4 0.893 0.307 0.34 -0.287 -- 0.242 19.4 0.4098 1701 -- --
20.82 0.213 10.3 0.975 0.306 -0.357 -- 2.46 0.228 19.2 0.1622 1649 -- --
21.57 0.216 10.4 0.9 0.306 0.328 -- -- 0.242 19.2 0.4162 1723 -- --
25.78 0.236 10.3 0.974 -- -0.341 -- 2.5 0.226 -- 2.288e-06 1693 -- --
22.53 0.223 10.4 0.979 0.314 -- -0.258 -- 0.225 19.3 -- -- -- --
22.71 0.223 10.4 0.984 0.314 -- -- -- 0.225 19.2 -- -- -- --
26.56 0.24 10.4 0.894 -- 0.336 -- -- 0.238 -- 1.444e-06 1766 -- --
40.09 0.295 10.4 -- 0.312 0.603 -- -- 0.186 19.4 0.6532 7016 -- --
27.94 0.247 10.4 0.979 -- -- -- -- 0.22 -- -- -- -- --
48.25 0.325 10.4 -- 0.305 -- -- -- 0.115 19.4 -- -- -- --
36.12 0.28 10.3 -- -- 0.618 -- -- 0.251 -- 0.8499 47520 -- --
53.21 0.34 10.4 -- -- -- -- -- 0.111 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.70 humidity 80 1440 > th dose dependent rect. 20 1
2 19.73 humidity 90 1440 > th dose dependent rect. 20 3
3 19.81 humidity 90 4320 > th dose independent rect. 4 1
7 19.88 humidity 90 1440 > th dose dependent rect. 18 5
9 19.90 wind 1 43200 > th dose independent rect. 8 2
11 19.93 wind 1 4320 > th dose independent rect. 4 2
15 19.96 wind 1 4320 < th dose independent rect. 3 3
18 20.00 humidity 70 43200 > th dose dependent rect. 13 11
19 20.00 humidity 70 43200 > th dose dependent rect. 12 13
23 20.03 atmosphere 1010 270 < th dose independent rect. 8 16
24 20.03 wind 5 43200 < th dose dependent rect. 9 1
25 20.04 wind 1 43200 < th dose independent rect. 8 2
26 20.04 wind 7 43200 < th dose dependent rect. 11 1
27 20.04 wind 1 43200 > th dose dependent rect. 11 2
30 20.06 humidity 80 43200 < th dose independent rect. 5 1
34 20.08 wind 5 14400 < th dose independent rect. 12 1
35 20.08 wind 5 43200 < th dose independent rect. 8 8
36 20.08 humidity 80 43200 < th dose independent rect. 1 16
38 20.08 humidity 70 43200 > th dose dependent sin 17 NA
40 20.08 wind 3 43200 < th dose dependent rect. 16 1
42 20.08 wind 5 43200 < th dose dependent rect. 8 5
43 20.09 humidity 90 1440 > th dose independent rect. 20 3
44 20.09 wind 5 43200 > th dose independent rect. 9 7
46 20.09 humidity 80 43200 < th dose independent rect. 2 14
47 20.09 humidity 70 43200 > th dose dependent rect. 5 21
48 20.10 humidity 80 43200 < th dose independent rect. 24 19
55 20.11 wind 5 14400 > th dose independent rect. 12 1
56 20.11 humidity 90 4320 < th dose independent rect. 4 1
59 20.11 wind 5 43200 < th dose independent rect. 5 12
62 20.11 wind 1 43200 < th dose dependent rect. 13 6
71 20.12 humidity 80 43200 > th dose independent rect. 1 19
74 20.12 wind 3 43200 > th dose dependent rect. 7 9
82 20.13 humidity 80 43200 < th dose independent rect. 3 12
85 20.13 wind 9 43200 > th dose dependent rect. 17 1
88 20.13 humidity 80 43200 < th dose dependent rect. 5 1
91 20.13 humidity 80 43200 > th dose dependent rect. 20 4
92 20.13 wind 1 43200 > th dose dependent rect. 8 6
99 20.14 atmosphere 1010 270 < th dose independent rect. 19 17
102 20.14 wind 1 43200 > th dose dependent rect. 9 1
103 20.14 humidity 60 1440 > th dose dependent rect. 20 1
105 20.14 humidity 80 43200 > th dose dependent rect. 21 2
113 20.15 humidity 80 43200 < th dose independent sin 3 NA
114 20.15 humidity 90 1440 < th dose independent rect. 20 3
117 20.15 wind 5 43200 > th dose independent rect. 5 12
118 20.15 humidity 80 43200 > th dose independent rect. 1 17
120 20.15 humidity 80 43200 > th dose independent rect. 5 19
132 20.16 wind 1 43200 > th dose dependent rect. 9 4
150 20.18 wind 5 43200 < th dose independent sin 1 NA
153 20.18 wind 1 43200 > th dose independent rect. 15 6
156 20.18 humidity 80 43200 > th dose independent rect. 3 13
170 20.19 humidity 80 43200 > th dose independent sin 3 NA
173 20.19 atmosphere 995 43200 > th dose independent rect. 12 1
177 20.19 humidity 80 43200 > th dose independent rect. 2 15
180 20.19 wind 3 43200 < th dose dependent rect. 24 4
192 20.20 wind 9 43200 > th dose independent rect. 20 3
212 20.21 wind 9 43200 < th dose independent rect. 20 3
214 20.21 humidity 80 43200 > th dose independent rect. 4 10
218 20.21 humidity 80 43200 > th dose independent rect. 11 14
225 20.21 atmosphere 995 43200 < th dose dependent rect. 14 1
232 20.21 humidity 80 43200 < th dose dependent rect. 24 8
236 20.22 wind 5 43200 > th dose independent sin 1 NA
264 20.23 wind 3 43200 > th dose dependent sin 2 NA
265 20.23 wind 7 43200 > th dose dependent rect. 20 2
276 20.24 wind 9 43200 < th dose independent rect. 20 1
277 20.24 humidity 80 43200 > th dose independent rect. 24 1
282 20.24 humidity 90 1440 > th dose independent rect. 18 5
283 20.24 wind 1 43200 < th dose independent rect. 15 6
326 20.26 humidity 80 43200 > th dose independent rect. 4 1
339 20.26 atmosphere 1010 90 < th dose independent rect. 22 14
350 20.26 atmosphere 995 43200 < th dose dependent rect. 13 3
356 20.26 wind 1 43200 > th dose dependent rect. 24 16
362 20.27 wind 9 43200 > th dose independent rect. 20 1
366 20.27 atmosphere 995 43200 < th dose independent rect. 10 5
368 20.27 humidity 80 43200 > th dose independent rect. 23 7
373 20.27 humidity 80 43200 < th dose independent rect. 6 18
378 20.27 wind 9 43200 > th dose dependent rect. 17 4
381 20.27 wind 9 43200 < th dose dependent rect. 24 16
392 20.28 wind 1 43200 < th dose independent rect. 24 4
404 20.28 humidity 80 43200 < th dose independent rect. 11 14
406 20.28 humidity 80 43200 > th dose independent rect. 10 16
408 20.28 wind 5 43200 < th dose independent rect. 24 18
412 20.28 humidity 70 43200 > th dose dependent no NA NA
432 20.28 wind 9 43200 < th dose dependent rect. 2 14
437 20.28 humidity 70 43200 > th dose dependent rect. 9 23
439 20.28 humidity 70 43200 > th dose dependent rect. 20 23
458 20.29 wind 9 43200 > th dose dependent rect. 19 6
460 20.29 humidity 80 43200 > th dose dependent rect. 19 6
478 20.30 wind 1 43200 > th dose independent rect. 24 4
520 20.31 humidity 80 43200 < th dose independent rect. 22 8
521 20.31 wind 1 43200 < th dose independent rect. 1 11
531 20.31 wind 9 43200 < th dose dependent sin 3 NA
561 20.32 humidity 80 43200 < th dose independent rect. 1 1
576 20.32 humidity 80 43200 < th dose independent rect. 22 10
585 20.32 wind 3 43200 > th dose dependent rect. 20 1
638 20.33 humidity 80 43200 < th dose independent rect. 12 12
647 20.33 wind 5 43200 > th dose independent rect. 24 18
677 20.33 wind 1 43200 > th dose dependent rect. 20 20
682 20.34 humidity 80 43200 > th dose independent sin 18 NA
683 20.34 radiation 1 1440 < th dose independent rect. 11 1
707 20.34 wind 5 43200 < th dose independent rect. 24 21
711 20.34 wind 1 4320 < th dose dependent rect. 18 1
713 20.34 radiation 1 1440 < th dose dependent rect. 11 1
735 20.34 wind 5 43200 > th dose dependent rect. 5 16
759 20.35 humidity 80 43200 < th dose independent rect. 10 16
766 20.35 wind 5 43200 > th dose independent rect. 24 21
790 20.35 wind 9 43200 < th dose dependent rect. 20 20
810 20.36 atmosphere 995 43200 > th dose independent rect. 8 7
861 20.36 humidity 70 43200 > th dose dependent rect. 16 23
925 20.37 humidity 70 43200 > th dose dependent rect. 14 23
927 20.38 humidity 80 43200 < th dose independent sin 18 NA
951 20.38 temperature 15 270 > th dose independent rect. 8 16