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Os01g0900200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.53 (0.0334) R2 : 0.37
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.42 (0.0873) R2dC : 0.365 R2C : 0.364
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.134 (0.0703) R2dN8 : 0.00647 R2N8 : 0.00486
σ : 0.63
deviance : 181.44
__
_____
C
peak time of C : 6.69
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
148.27 0.572 5.52 0.2 1.49 -0.427 -1.27 15.6 0.245 6.37 1005 11 2.01 0.917
157.34 0.584 5.51 0.0512 1.54 -1.59 -1.03 -- 0.246 6.25 1005 33 2.4 1.25
152.16 0.575 5.52 0.174 1.47 -0.416 -- 14.8 0.252 6.38 1005 11 2 0.93
159.67 0.589 5.5 9.24e-05 1.54 -1.64 -- -- 0.248 6.31 1005 36 2.42 1.28
264.37 0.757 5.52 0.0687 -- 0.145 -- 17 0.29 -- 1007 11 2.02 0.884
179.31 0.628 5.53 -0.0271 1.42 -- -0.913 -- 0.126 6.64 -- -- -- --
181.39 0.631 5.53 -0.0404 1.42 -- -- -- 0.129 6.68 -- -- -- --
275.35 0.776 5.53 -0.00525 -- -1.2 -- -- 0.25 -- 1006 35 2.37 1.12
159.61 0.588 5.5 -- 1.53 -1.69 -- -- 0.237 6.37 1005 36 2.4 1.26
285.97 0.79 5.56 -0.00748 -- -- -- -- 0.158 -- -- -- -- --
181.44 0.63 5.53 -- 1.42 -- -- -- 0.134 6.69 -- -- -- --
275.34 0.773 5.54 -- -- -1.2 -- -- 0.25 -- 1006 35 2.37 1.06
285.97 0.789 5.56 -- -- -- -- -- 0.158 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 148.49 atmosphere 1005.0 10 > th dose dependent rect. 2 1
2 149.30 atmosphere 1005.0 10 > th dose independent rect. 2 1
5 149.83 wind 1.0 30 < th dose independent rect. 2 1
10 150.29 wind 3.0 30 < th dose dependent rect. 2 1
17 150.63 temperature 25.0 30 < th dose independent rect. 2 1
18 150.72 wind 9.0 30 < th dose independent rect. 2 1
19 150.72 temperature 10.0 30 > th dose independent rect. 2 1
22 150.72 humidity 50.0 30 > th dose independent rect. 2 1
26 150.72 atmosphere 1010.0 30 < th dose independent rect. 2 1
28 150.72 radiation 1.0 30 < th dose independent rect. 2 1
33 150.72 precipitation 0.1 30 < th dose independent rect. 2 1
34 150.72 temperature 10.0 30 > th dose independent rect. 3 23
35 150.72 radiation 1.0 30 < th dose dependent rect. 2 1
40 150.72 precipitation 0.1 30 < th dose dependent rect. 2 1
41 150.73 temperature 10.0 30 > th dose dependent rect. 2 1
48 150.84 radiation 1.0 14400 < th dose dependent rect. 3 1
49 151.01 humidity 50.0 30 > th dose dependent rect. 2 1
50 151.02 temperature 30.0 30 < th dose dependent rect. 2 1
64 151.78 atmosphere 1015.0 30 < th dose dependent rect. 2 1
75 151.86 wind 9.0 1440 < th dose independent rect. 3 1
76 151.86 temperature 10.0 1440 > th dose independent rect. 3 1
79 151.86 temperature 30.0 1440 < th dose independent rect. 3 1
83 151.86 humidity 50.0 1440 > th dose independent rect. 3 1
92 151.86 atmosphere 995.0 1440 > th dose independent rect. 3 1
93 151.86 radiation 1.0 1440 < th dose independent rect. 3 1
113 151.86 temperature 10.0 1440 > th dose independent rect. 4 23
128 152.38 temperature 25.0 90 > th dose dependent rect. 1 3
129 152.55 wind 9.0 30 < th dose independent rect. 3 23
153 152.60 wind 1.0 30 > th dose independent rect. 2 1
161 153.10 atmosphere 995.0 30 > th dose independent rect. 3 23
164 153.37 precipitation 0.1 30 < th dose independent rect. 3 23
165 153.37 precipitation 0.1 30 < th dose dependent rect. 3 23
201 158.75 temperature 25.0 270 > th dose independent rect. 23 4
206 159.05 humidity 50.0 30 > th dose independent rect. 3 23
221 160.02 temperature 25.0 270 > th dose dependent rect. 23 4
276 161.67 atmosphere 1005.0 270 > th dose independent rect. 23 4
294 162.24 humidity 90.0 90 < th dose independent rect. 2 1
325 163.72 radiation 10.0 1440 < th dose dependent rect. 24 5
326 163.80 humidity 90.0 270 < th dose independent rect. 23 6
339 164.12 wind 1.0 1440 < th dose dependent rect. 6 1
342 164.15 wind 9.0 30 < th dose dependent rect. 3 23
344 164.21 radiation 20.0 30 < th dose dependent rect. 12 14
348 164.32 temperature 10.0 30 > th dose dependent rect. 3 23
358 164.52 wind 1.0 1440 < th dose independent rect. 6 1
361 164.63 wind 1.0 1440 > th dose independent rect. 5 5
367 164.73 wind 1.0 1440 < th dose independent rect. 5 3
396 165.04 wind 1.0 1440 > th dose independent rect. 6 1
410 165.21 radiation 1.0 1440 > th dose independent rect. 11 1
419 165.32 radiation 10.0 30 < th dose independent rect. 13 13
424 165.36 wind 1.0 10 < th dose independent rect. 14 13
427 165.41 wind 1.0 10 < th dose independent rect. 17 10
430 165.42 atmosphere 1015.0 30 < th dose independent rect. 3 23
443 165.58 radiation 1.0 1440 < th dose independent rect. 24 5
463 165.74 radiation 40.0 1440 < th dose dependent rect. 21 9
488 165.97 temperature 10.0 10 > th dose dependent rect. 6 20
511 166.20 radiation 10.0 10 < th dose dependent rect. 6 20
535 166.37 temperature 10.0 270 > th dose dependent rect. 3 20
563 166.55 atmosphere 1005.0 30 > th dose dependent rect. 6 5
567 166.58 radiation 1.0 1440 < th dose independent rect. 11 1
570 166.58 radiation 1.0 1440 < th dose dependent rect. 11 1
582 166.63 humidity 60.0 14400 > th dose independent rect. 24 7
587 166.65 temperature 10.0 10 > th dose dependent rect. 6 17
590 166.67 temperature 10.0 270 > th dose dependent rect. 3 8
593 166.68 temperature 30.0 30 < th dose independent rect. 3 23
595 166.70 radiation 1.0 10 < th dose independent rect. 6 20
612 166.80 humidity 60.0 14400 > th dose independent rect. 3 4
639 166.93 temperature 15.0 270 > th dose dependent rect. 3 6
721 167.22 radiation 1.0 1440 > th dose independent rect. 4 1
731 167.22 radiation 1.0 1440 > th dose dependent rect. 4 1
771 167.33 radiation 10.0 270 > th dose independent rect. 17 14
794 167.48 atmosphere 995.0 10 > th dose independent rect. 17 9
803 167.51 temperature 30.0 270 < th dose independent rect. 22 19
809 167.53 temperature 30.0 30 < th dose independent rect. 2 15
812 167.54 radiation 1.0 1440 > th dose independent rect. 9 5
815 167.54 wind 9.0 270 < th dose independent rect. 3 20
821 167.56 wind 9.0 10 < th dose independent rect. 17 9
824 167.57 atmosphere 995.0 43200 > th dose independent rect. 11 14
826 167.58 atmosphere 995.0 43200 > th dose independent sin 18 NA
829 167.59 temperature 15.0 10 > th dose independent rect. 17 9
831 167.59 radiation 1.0 270 > th dose dependent rect. 17 14
833 167.60 atmosphere 995.0 43200 > th dose independent rect. 10 16
853 167.67 atmosphere 995.0 43200 < th dose independent sin 18 NA
856 167.68 atmosphere 995.0 43200 < th dose independent rect. 12 13
894 167.73 atmosphere 995.0 43200 < th dose independent rect. 10 16
895 167.73 temperature 15.0 270 > th dose independent rect. 3 20
898 167.75 wind 1.0 270 > th dose independent rect. 23 4
908 167.78 atmosphere 995.0 43200 > th dose independent rect. 9 18
950 167.93 radiation 20.0 10 < th dose independent rect. 17 9
953 167.93 temperature 10.0 10 > th dose independent rect. 2 15
955 167.93 atmosphere 1015.0 10 < th dose independent rect. 2 15
961 167.94 temperature 30.0 270 < th dose independent rect. 13 14
966 167.96 temperature 30.0 1440 < th dose independent rect. 3 6
972 167.97 precipitation 0.1 10 < th dose independent rect. 17 9
973 167.97 precipitation 0.1 10 < th dose dependent rect. 17 9
974 167.98 atmosphere 995.0 43200 < th dose independent rect. 13 11
976 167.98 atmosphere 995.0 43200 > th dose independent rect. 23 20