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Os01g0893400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : BTB domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0244) R2 : 0.566
β1 : -1.6 (0.0893) R2dD : 0.318 R2D : 0.137
β2 : 0.657 (0.0637) R2dC : 0.102 R2C : 0.0447
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.81 (0.0521) R2dN8 : 0.309 R2N8 : 0.141
σ : 0.458
deviance : 95.85
__
_____
C
peak time of C : 18.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.98 0.42 11.3 -1.53 0.436 -0.734 -0.253 0.143 -0.957 20.5 87.29 40 -- --
80.03 0.417 11.3 -1.52 0.435 -0.724 -0.232 -- -0.955 20.5 87.15 41 -- --
80.15 0.417 11.3 -1.52 0.431 -0.737 -- 0.12 -0.964 20.6 87.04 43 -- --
80.17 0.417 11.3 -1.51 0.434 -0.736 -- -- -0.957 20.7 87 43 -- --
89.47 0.441 11.3 -1.52 -- -0.834 -- 0.264 -0.961 -- 87.61 140 -- --
95.75 0.459 11.3 -1.6 0.658 -- -0.204 -- -0.809 18.1 -- -- -- --
95.85 0.458 11.3 -1.6 0.657 -- -- -- -0.81 18.1 -- -- -- --
89.64 0.441 11.3 -1.51 -- -0.818 -- -- -0.96 -- 87.5 138 -- --
139.4 0.55 11.3 -- 0.435 -0.893 -- -- -0.828 21.2 87.5 38 -- --
118.23 0.508 11.3 -1.62 -- -- -- -- -0.824 -- -- -- -- --
163.54 0.598 11.2 -- 0.681 -- -- -- -0.631 18 -- -- -- --
148.99 0.569 11.2 -- -- -0.959 -- -- -0.814 -- 87.6 159 -- --
187.56 0.639 11.2 -- -- -- -- -- -0.645 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.46 humidity 60.0 270 > th dose dependent rect. 23 6
4 64.62 humidity 70.0 270 > th dose dependent rect. 24 4
9 65.23 humidity 60.0 270 > th dose dependent rect. 1 2
21 65.86 wind 9.0 270 < th dose independent rect. 4 21
27 66.14 wind 9.0 270 < th dose independent rect. 5 18
31 66.32 radiation 10.0 90 < th dose dependent rect. 1 13
35 66.39 precipitation 0.1 270 < th dose independent rect. 1 3
36 66.39 precipitation 0.1 270 < th dose dependent rect. 1 3
40 66.55 temperature 10.0 270 > th dose independent rect. 1 3
42 66.55 temperature 30.0 270 < th dose independent rect. 1 3
43 66.55 humidity 50.0 270 > th dose independent rect. 1 3
46 66.55 atmosphere 995.0 270 > th dose independent rect. 1 3
47 66.55 atmosphere 1010.0 270 < th dose independent rect. 1 3
49 66.55 radiation 1.0 270 < th dose independent rect. 1 3
54 66.55 temperature 10.0 270 > th dose independent rect. 4 21
55 66.55 radiation 1.0 270 < th dose dependent rect. 1 3
60 66.57 wind 9.0 270 < th dose independent rect. 1 3
61 66.62 radiation 10.0 90 < th dose dependent rect. 1 6
62 66.66 precipitation 0.1 270 < th dose independent rect. 23 6
63 66.66 precipitation 0.1 270 < th dose dependent rect. 23 6
64 66.67 radiation 1.0 270 < th dose independent rect. 23 6
66 66.68 radiation 10.0 270 < th dose dependent rect. 23 6
68 66.71 radiation 10.0 90 < th dose independent rect. 1 5
72 66.75 temperature 10.0 270 > th dose independent rect. 23 6
73 66.75 temperature 30.0 270 < th dose independent rect. 23 6
74 66.75 humidity 50.0 270 > th dose independent rect. 23 6
77 66.75 atmosphere 995.0 270 > th dose independent rect. 23 6
81 66.75 temperature 10.0 270 > th dose independent rect. 5 18
83 66.76 wind 9.0 270 < th dose independent rect. 23 6
88 66.81 temperature 10.0 270 > th dose dependent rect. 1 3
168 67.28 radiation 10.0 90 < th dose dependent rect. 1 16
183 67.46 atmosphere 1015.0 270 < th dose dependent rect. 1 2
185 67.51 precipitation 0.1 270 < th dose independent rect. 5 18
187 67.51 precipitation 0.1 270 < th dose dependent rect. 5 18
209 67.60 atmosphere 1015.0 270 < th dose independent rect. 5 18
211 67.68 temperature 10.0 90 > th dose dependent rect. 1 5
214 67.74 precipitation 0.1 270 < th dose independent rect. 4 20
216 67.74 precipitation 0.1 270 < th dose dependent rect. 4 20
227 67.84 wind 9.0 270 < th dose dependent rect. 1 3
257 68.42 temperature 10.0 270 > th dose dependent rect. 24 17
265 68.54 wind 9.0 270 < th dose dependent rect. 23 6
272 68.64 atmosphere 1015.0 270 < th dose independent rect. 4 20
278 68.80 wind 1.0 270 > th dose independent rect. 4 20
280 68.81 wind 1.0 270 > th dose independent rect. 1 2
290 68.98 atmosphere 995.0 270 > th dose independent rect. 12 16
291 69.02 wind 7.0 270 < th dose independent rect. 19 14
297 69.08 wind 1.0 90 > th dose independent rect. 6 19
314 69.28 radiation 10.0 90 < th dose dependent sin 5 NA
325 69.43 atmosphere 995.0 270 > th dose independent rect. 24 17
341 69.60 radiation 1.0 270 < th dose dependent rect. 5 19
348 69.70 precipitation 0.1 10 < th dose independent rect. 6 19
349 69.70 precipitation 0.1 10 < th dose dependent rect. 6 19
372 69.75 wind 9.0 10 < th dose independent rect. 1 5
390 69.76 wind 9.0 1440 < th dose independent rect. 2 5
391 69.76 temperature 10.0 1440 > th dose independent rect. 2 5
394 69.76 temperature 30.0 1440 < th dose independent rect. 2 5
399 69.76 humidity 50.0 1440 > th dose independent rect. 2 5
404 69.76 atmosphere 995.0 1440 > th dose independent rect. 2 5
405 69.76 radiation 40.0 1440 < th dose independent rect. 2 5
409 69.76 temperature 10.0 1440 > th dose independent rect. 7 19
415 69.78 radiation 1.0 270 < th dose independent rect. 5 19
450 69.88 humidity 70.0 10 > th dose dependent rect. 3 3
468 69.99 wind 9.0 270 < th dose independent rect. 16 8
496 70.11 radiation 10.0 10 < th dose dependent sin 3 NA
500 70.14 temperature 30.0 270 < th dose independent rect. 19 14
501 70.14 humidity 50.0 270 > th dose independent rect. 4 20
513 70.17 atmosphere 995.0 270 > th dose independent rect. 10 9
514 70.18 precipitation 0.1 270 < th dose independent rect. 9 10
517 70.18 precipitation 0.1 270 < th dose dependent rect. 9 10
519 70.19 temperature 10.0 10 > th dose dependent rect. 3 3
529 70.27 atmosphere 995.0 90 > th dose independent rect. 6 19
554 70.37 precipitation 0.1 270 < th dose independent rect. 4 8
555 70.37 precipitation 0.1 270 < th dose dependent rect. 4 8
556 70.38 wind 9.0 270 < th dose independent rect. 4 8
560 70.39 temperature 10.0 270 > th dose independent rect. 4 8
561 70.39 atmosphere 995.0 270 > th dose independent rect. 4 8
562 70.39 atmosphere 1015.0 270 < th dose independent rect. 4 8
563 70.39 temperature 10.0 270 > th dose independent rect. 12 16
564 70.39 radiation 40.0 270 < th dose independent rect. 12 16
574 70.43 wind 9.0 10 < th dose dependent rect. 3 3
577 70.44 precipitation 0.1 270 < th dose independent rect. 24 16
579 70.44 precipitation 0.1 270 < th dose dependent rect. 24 16
592 70.50 humidity 50.0 270 > th dose independent rect. 5 18
593 70.50 wind 9.0 10 < th dose independent rect. 6 21
595 70.51 radiation 40.0 270 < th dose dependent rect. 16 8
604 70.55 temperature 10.0 270 > th dose independent rect. 16 8
605 70.55 radiation 40.0 270 < th dose independent rect. 16 8
606 70.55 temperature 10.0 270 > th dose independent rect. 9 10
607 70.55 atmosphere 1015.0 270 < th dose independent rect. 9 10
608 70.55 temperature 10.0 270 > th dose independent rect. 19 14
609 70.55 humidity 50.0 270 > th dose independent rect. 19 14
610 70.55 atmosphere 995.0 270 > th dose independent rect. 19 14
611 70.55 temperature 10.0 270 > th dose independent rect. 24 16
617 70.56 atmosphere 1015.0 270 < th dose independent rect. 24 16
618 70.56 precipitation 0.1 270 < th dose independent rect. 12 16
621 70.56 precipitation 0.1 270 < th dose dependent rect. 12 16
631 70.67 radiation 30.0 10 < th dose dependent rect. 3 3
633 70.68 radiation 10.0 10 < th dose independent rect. 3 3
663 70.76 wind 1.0 270 > th dose independent rect. 17 7
691 70.82 radiation 10.0 90 < th dose independent rect. 1 16
705 70.84 atmosphere 1015.0 90 < th dose dependent rect. 3 2
707 70.85 wind 9.0 10 < th dose independent rect. 3 3
708 70.85 temperature 10.0 10 > th dose independent rect. 3 3
710 70.85 temperature 30.0 10 < th dose independent rect. 3 3
711 70.85 humidity 50.0 10 > th dose independent rect. 3 3
714 70.85 atmosphere 995.0 10 > th dose independent rect. 3 3
715 70.85 atmosphere 1010.0 10 < th dose independent rect. 3 3
726 70.85 temperature 10.0 10 > th dose independent rect. 6 21
735 70.88 precipitation 0.1 10 < th dose independent rect. 6 21
737 70.88 precipitation 0.1 10 < th dose dependent rect. 6 21
851 71.05 precipitation 0.1 10 < th dose independent rect. 3 3
854 71.05 precipitation 0.1 10 < th dose dependent rect. 3 3
856 71.06 wind 9.0 270 < th dose independent rect. 24 16
868 71.12 humidity 50.0 270 > th dose independent rect. 17 7
963 71.31 radiation 40.0 90 < th dose independent rect. 12 18
992 71.38 precipitation 0.1 270 < th dose independent rect. 16 8
993 71.38 precipitation 0.1 270 < th dose independent rect. 19 14
997 71.38 precipitation 0.1 270 < th dose dependent rect. 16 8
999 71.38 precipitation 0.1 270 < th dose dependent rect. 19 14