BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0893400 Os01g0893400|AK061917
(413 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G67480.2 | chr5:26931055-26932529 REVERSE LENGTH=384 333 9e-92
AT1G05690.1 | chr1:1707809-1709132 FORWARD LENGTH=365 302 2e-82
AT4G37610.1 | chr4:17670606-17671992 REVERSE LENGTH=369 293 1e-79
AT5G63160.1 | chr5:25333485-25335399 REVERSE LENGTH=366 209 3e-54
AT3G48360.1 | chr3:17908482-17910471 REVERSE LENGTH=365 204 5e-53
AT1G79000.2 | chr1:29716639-29723984 REVERSE LENGTH=1742 81 8e-16
AT1G16710.1 | chr1:5714692-5721782 FORWARD LENGTH=1707 74 1e-13
AT3G12980.1 | chr3:4146919-4154495 FORWARD LENGTH=1671 62 6e-10
AT1G67220.1 | chr1:25145587-25150450 FORWARD LENGTH=1368 49 7e-06
>AT5G67480.2 | chr5:26931055-26932529 REVERSE LENGTH=384
Length = 383
Score = 333 bits (854), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 223/353 (63%), Gaps = 4/353 (1%)
Query: 49 SQCTNAPDPPPLPGTSYGTHRTSRNAKACRCVPEEIQDFWDRMFFEAYQYDLRVLTEDGN 108
+ ++ P PPPLP S G + ++ V +D WDR+F + Y+ D+ + T++G+
Sbjct: 26 ADSSSVPIPPPLPSKSDGLKKKLGHSS----VSTATRDMWDRLFNDGYKADVVIYTDNGS 81
Query: 109 EIMSHSCVVGIKSPVLRAMLEEAKVQGGIRHILIPGVPSEAVHVFIRFLYSSRFEQYQMK 168
I +H+ ++G S V++ ML++AK G I I GVP +AV VFIRFLYSS +E+ +M
Sbjct: 82 IIYAHANILGTASTVIKGMLKQAKRHGKWHTISIRGVPHDAVRVFIRFLYSSCYEKEEMN 141
Query: 169 RYXXXXXXXXXXXXXXXXKRVCINQLETSLLSPENVVDILQLARLCDAPRLSLVCTRMII 228
+ KRVC LE LL+ ENVVD+ QLA LCD PRLSL+ RMI+
Sbjct: 142 EFIMHLLLLSHAYVVPQLKRVCEWHLEHGLLTTENVVDVFQLALLCDFPRLSLISHRMIM 201
Query: 229 GDFKAITQTEGWRVMRQANPXXXXXXXXXXXXXDTKRQERARRLEENKVYLQLHEAMEAL 288
F ++ TE W M++++P R+ER R+ + ++Y QL+EAMEAL
Sbjct: 202 KHFNELSATEAWTAMKKSHPFLEKEVRDSVIIEANTRKERMRKRNDQRIYSQLYEAMEAL 261
Query: 289 IHICRDGCRTIGPRDQTLKSSQAVCRFPACKGIELLLRHFSACKMRVPGGCANCKRIWQL 348
+HICRDGC+TIGP D+ K + A C + ACKG+E L+RHF+ CK+RVPGGC +CKR+WQL
Sbjct: 262 VHICRDGCKTIGPHDKDFKPNHATCNYEACKGLESLIRHFAGCKLRVPGGCVHCKRMWQL 321
Query: 349 LELHSRMCSALETCHVPLCRHFKEKMQHLSRKEEAKWNLLVSKVLESKATTSS 401
LELHSR+C+ + C VPLCR+ KEKM+ S+K+E++W LLV VL SK S
Sbjct: 322 LELHSRVCAGSDQCRVPLCRNLKEKMEKQSKKDESRWKLLVKNVLGSKKIGGS 374
>AT1G05690.1 | chr1:1707809-1709132 FORWARD LENGTH=365
Length = 364
Score = 302 bits (774), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/361 (44%), Positives = 233/361 (64%), Gaps = 4/361 (1%)
Query: 47 LPSQCTNAPDPPPLPGTSYGTHRTS--RNAKACRCVPEEIQDFWDRMFFEAYQYDLRVLT 104
+ S N P PPPLP +Y ++S + + R VP+E + WD++F E D V T
Sbjct: 1 MSSSTKNIPKPPPLPCITYQRFQSSTRKPSSLMRLVPKEALETWDKLFKEGSGADTYVET 60
Query: 105 EDGNEIMSHSCVVGIKSPVLRAMLEEAKVQGGIRHILIPGVPSEAVHVFIRFLYSSRFEQ 164
++ + +HS V+ SPV+ +L +++ + G ++ I GVP EAV++FIRFLYSS +E+
Sbjct: 61 DNKSHFPAHSSVLAAASPVIATLLNQSRDKNGNTYLKIHGVPCEAVYMFIRFLYSSCYEE 120
Query: 165 YQMKRYXXXXXXXXXXXXXXXXKRVCINQLETSLLSPENVVDILQLARLCDAPRLSLVCT 224
+MK++ KR+C+ L+ ++ ENV+D+LQLAR CD R+ VC
Sbjct: 121 EEMKKFVLHLLVLSHCYSVPSLKRLCVEILDQGWINKENVIDVLQLARNCDVTRICFVCL 180
Query: 225 RMIIGDFKAITQTEGWRVMRQANPXXXXXXXXXXXXXDTKRQERARRLEENKVYLQLHEA 284
M+I DFK+++ TEGW+VM+++NP D+++QER R+LEE +VYLQL+EA
Sbjct: 181 SMVIKDFKSVSSTEGWKVMKRSNPLLEQELIEAVIESDSRKQERRRKLEEREVYLQLYEA 240
Query: 285 MEALIHICRDGCRTIGPRDQTLKSSQAVCRFPACKGIELLLRHFSACKMRVPGGCANCKR 344
MEAL+HICR+GC TIGPRD+ LK S VC+FPACKG+E LRHF CK R C++CKR
Sbjct: 241 MEALVHICREGCGTIGPRDKALKGSHTVCKFPACKGLEGALRHFLGCKSR--ASCSHCKR 298
Query: 345 IWQLLELHSRMCSALETCHVPLCRHFKEKMQHLSRKEEAKWNLLVSKVLESKATTSSISE 404
+WQLL+LHS +C +C V LC +FKEKM+ LS+KE++KW LLV ++ ++ + S
Sbjct: 299 MWQLLQLHSCICDDSNSCKVSLCWNFKEKMKKLSKKEQSKWRLLVENIIRARNSLGPFSS 358
Query: 405 R 405
R
Sbjct: 359 R 359
>AT4G37610.1 | chr4:17670606-17671992 REVERSE LENGTH=369
Length = 368
Score = 293 bits (750), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 204/323 (63%), Gaps = 3/323 (0%)
Query: 80 VPEEIQDFWDRMFFEAYQYDLRVLTEDGNEIMSHSCVVGIKSPVLRAMLEEAKVQGGIRH 139
V + +D WDRMF EA+ D+ + T+D I +HS V+G+ S V+R M+++ K + +
Sbjct: 37 VSKATRDSWDRMFDEAHGADVLIHTDDNGLIYAHSNVIGMASDVIRGMMKQHKRKSHRKS 96
Query: 140 ILIPGVPSEAVHVFIRFLYSSRFEQYQMKRYXXXXXXXXXXXXXXXXKRVCINQLETSLL 199
I I GVP A+ VFIRFLYSS +E+ M+ + KRVC ++ E+SLL
Sbjct: 97 ISILGVPHHALRVFIRFLYSSCYEKQDMEDFAIHLLVLSHVYVVPHLKRVCESEFESSLL 156
Query: 200 SPENVVDILQLARLCDAPRLSLVCTRMIIGDFKAITQTEGWRVMRQANPXXXXXXXXXXX 259
+ ENV+D+ QLA LCDAPRL L+C RMI+ +F+ ++ +EGW+ M++++P
Sbjct: 157 NKENVIDVFQLALLCDAPRLGLLCHRMILNNFEEVSTSEGWQAMKESHPRLQKELLRSVA 216
Query: 260 XXDTKRQERARRLEENKVYLQLHEAMEALIHICRDGCRTIGPRDQTLKSSQAVCRFPACK 319
++R R+ +E + Y QL+EAMEA +HICRDGCR IGP ++ C F AC
Sbjct: 217 YELNSLKQRNRKQKEIQTYTQLYEAMEAFVHICRDGCREIGP--TKTETPHMSCGFQACN 274
Query: 320 GIELLLRHFSACKMR-VPGGCANCKRIWQLLELHSRMCSALETCHVPLCRHFKEKMQHLS 378
G+E LL+H + CK+R +PGGC+ CKR+WQLLELHSR+C E C VPLC KE+M+ S
Sbjct: 275 GLEQLLKHLAGCKLRSIPGGCSRCKRMWQLLELHSRICVDSEQCKVPLCSSLKERMKTQS 334
Query: 379 RKEEAKWNLLVSKVLESKATTSS 401
RK+E +W LLV VL +K S
Sbjct: 335 RKDEKRWKLLVRNVLSTKRIGGS 357
>AT5G63160.1 | chr5:25333485-25335399 REVERSE LENGTH=366
Length = 365
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 180/320 (56%), Gaps = 12/320 (3%)
Query: 89 DRMFFEAYQYDLRVLTEDGNEIMSHSCVVGIKSPVLRAMLEEA-KVQGGI--RHILIPGV 145
+++ ++ + D+ ++T I +HS ++ SPVL ++E+ K+ GG + I I GV
Sbjct: 16 NKISYDLVETDVEIITSGRRSIPAHSGILASVSPVLTNIIEKPRKIHGGSSKKVIKILGV 75
Query: 146 PSEAVHVFIRFLYSSRFEQYQMKRYXXXXXXXXXXXXXXXXKRVCINQLETSLLSPENVV 205
P +AV VF+RFLYS + +M++Y K+ C + + + ENVV
Sbjct: 76 PCDAVSVFVRFLYSPSVTENEMEKYGIHLLALSHVYMVTQLKQRCTKGVGERV-TAENVV 134
Query: 206 DILQLARLCDAPRLSLVCTRMIIGDFKAITQTEGWRVMRQANPXXXXXXXXXXXXXDTKR 265
DILQLARLCDAP L L C R I FK + QTEGW+ +++ +P ++++
Sbjct: 135 DILQLARLCDAPDLCLKCMRFIHYKFKTVEQTEGWKFLQEHDPFLELDILQFIDDAESRK 194
Query: 266 QERARRLEENKVYLQLHEAMEALIHICRDGCRTIGPRDQ-----TLKSSQAVCR-FPACK 319
+ R R E +YLQL EAME + HIC +GC +GP T ++ C F C
Sbjct: 195 KRRRRHRREQNLYLQLSEAMECIEHICTEGCTLVGPSSNLDNKSTCQAKPGPCSAFSTCY 254
Query: 320 GIELLLRHFSACKMRVPG-GCANCKRIWQLLELHSRMCSALETCHVPLCRHFKEKMQHLS 378
G++LL+RHF+ CK RV G GC CKR+ QLL LHS +C E+C VPLCR +K + +
Sbjct: 255 GLQLLIRHFAVCKKRVDGKGCVRCKRMIQLLRLHSSICDQSESCRVPLCRQYKNRGEKDK 314
Query: 379 RK-EEAKWNLLVSKVLESKA 397
+ E+ KW +LV +V +KA
Sbjct: 315 KMVEDTKWKVLVRRVASAKA 334
>AT3G48360.1 | chr3:17908482-17910471 REVERSE LENGTH=365
Length = 364
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 184/341 (53%), Gaps = 21/341 (6%)
Query: 80 VPEEIQDFWDRMFFEAYQY------DLRVLTEDGNEIMSHSCVVGIKSPVLRAMLEEAKV 133
VP +D + + Y D+ ++T D I +HS V+ SPVL ++++
Sbjct: 10 VPATTEDDGFSLITDKLSYNLTPTSDVEIVTSDNRRIPAHSGVLASASPVLMNIMKKPMR 69
Query: 134 Q----GGIRHILIPGVPSEAVHVFIRFLYSSRFEQYQMKRYXXXXXXXXXXXXXXXXKRV 189
+ G R I I GVP +AV VFI+FLYSS + +M+RY K+
Sbjct: 70 RYRGCGSKRVIKILGVPCDAVSVFIKFLYSSSLTEDEMERYGIHLLALSHVYMVTQLKQR 129
Query: 190 CINQLETSLLSPENVVDILQLARLCDAPRLSLVCTRMIIGDFKAITQTEGWRVMRQANPX 249
C + L+ ENVVD+LQLARLCDAP + L R+I FK + QTEGW+ +++ +P
Sbjct: 130 CSKGV-VQRLTTENVVDVLQLARLCDAPDVCLRSMRLIHSQFKTVEQTEGWKFIQEHDPF 188
Query: 250 XXXXXXXXXXXXDTKRQERARRLEENKVYLQLHEAMEALIHICRDGCRTIGP-------- 301
+++++ R R +E +Y+QL EAME + HIC GC +GP
Sbjct: 189 LELDILQFIDDAESRKKRRRRHRKEQDLYMQLSEAMECIEHICTQGCTLVGPSNVVDNNK 248
Query: 302 RDQTLKSSQAVCRFPACKGIELLLRHFSACKMRVPG-GCANCKRIWQLLELHSRMCSALE 360
+ T + S+ F C G++LL+RHF+ CK R GC CKR+ QL LHS +C +
Sbjct: 249 KSMTAEKSEPCKAFSTCYGLQLLIRHFAVCKRRNNDKGCLRCKRMLQLFRLHSLICDQPD 308
Query: 361 TCHVPLCRHFKEKMQHLSR-KEEAKWNLLVSKVLESKATTS 400
+C VPLCR F+++ + + E+ KW LLV++V+ +KA TS
Sbjct: 309 SCRVPLCRQFRKRGEQDKKMGEDTKWKLLVTRVVSAKAMTS 349
>AT1G79000.2 | chr1:29716639-29723984 REVERSE LENGTH=1742
Length = 1741
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 15/119 (12%)
Query: 279 LQLHEAMEALIHICRDGCRTIGPRDQTLKSSQAVCRFPACKGIELLLRHFSACKMRVPGG 338
LQL + ++ L+H + CR+ A C++P C+ ++ L RH CK+R GG
Sbjct: 1586 LQLRKMLDLLVHASQ--CRS------------AHCQYPNCRKVKGLFRHGINCKVRASGG 1631
Query: 339 CANCKRIWQLLELHSRMCSALETCHVPLCRHFKEKMQHLSRKEEAKWNLLVSKVLESKA 397
C CK++W LL+LH+R C E CHVP CR KE ++ L ++ +++ V +++ +A
Sbjct: 1632 CVLCKKMWYLLQLHARACKESE-CHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRA 1689
>AT1G16710.1 | chr1:5714692-5721782 FORWARD LENGTH=1707
Length = 1706
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 15/119 (12%)
Query: 279 LQLHEAMEALIHICRDGCRTIGPRDQTLKSSQAVCRFPACKGIELLLRHFSACKMRVPGG 338
LQL + ++ L+H + CR+ VC +P C+ ++ L RH CK+R GG
Sbjct: 1595 LQLRKMLDLLVHASQ--CRS------------PVCLYPNCRKVKGLFRHGLRCKVRASGG 1640
Query: 339 CANCKRIWQLLELHSRMCSALETCHVPLCRHFKEKMQHLSRKEEAKWNLLVSKVLESKA 397
C CK++W LL+LH+R C E C VP C KE ++ L ++ +++ V +++ +A
Sbjct: 1641 CVLCKKMWYLLQLHARACKESE-CDVPRCGDLKEHLRRLQQQSDSRRRAAVMEMMRQRA 1698
>AT3G12980.1 | chr3:4146919-4154495 FORWARD LENGTH=1671
Length = 1670
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 311 AVCRFPACKGIELLLRHFSACKMRVPGGCANCKRIWQLLELHSRMCSALETCHVPLCR-- 368
A C++P C+ I+ L+RH CK R GC CK++W L LHSR C + C VP CR
Sbjct: 1579 AQCQYPRCRVIKGLIRHGLVCKTR---GCIACKKMWSLFRLHSRNCRDPQ-CKVPKCREL 1634
Query: 369 --HFKEKMQHL-SRKEEAKWNLLVSKVLESKATT 399
HF K Q SR+ A ++ + ++ A+T
Sbjct: 1635 RAHFSRKQQQADSRRRAAVMEMVRQRAADTTAST 1668
>AT1G67220.1 | chr1:25145587-25150450 FORWARD LENGTH=1368
Length = 1367
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 313 CRFPACKGIELLLRHFSACKMRVPGG-CANCKRIWQLLELHSRMCSALETCHVPLCRHFK 371
C +P C ++ L H CK+R G C C ++WQ + +H C L C VP CR K
Sbjct: 1302 CSYPKCHEVKALFTHNVQCKIRKKGTRCNTCYKLWQTIRIHVYHCQDL-NCPVPQCRDRK 1360
Query: 372 E 372
E
Sbjct: 1361 E 1361
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.135 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,462,777
Number of extensions: 329683
Number of successful extensions: 890
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 872
Number of HSP's successfully gapped: 10
Length of query: 413
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 312
Effective length of database: 8,337,553
Effective search space: 2601316536
Effective search space used: 2601316536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)