Os01g0892200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0892200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.93 | 0.556 | 6.83 | 1.37 | 1.94 | -1.19 | 0.211 | 1.26 | 0.32 | 18.2 | 1 | 1 | -- | -- |
| 141.09 | 0.557 | 6.85 | 1.2 | 1.94 | -1.19 | 0.333 | -- | 0.273 | 18.1 | 6.43 | 2 | -- | -- |
| 140.04 | 0.555 | 6.83 | 1.36 | 1.93 | -1.2 | -- | 1.26 | 0.319 | 18.1 | 2.706 | 1 | -- | -- |
| 141.36 | 0.557 | 6.85 | 1.19 | 1.94 | -1.18 | -- | -- | 0.273 | 18.1 | 4.681 | 2 | -- | -- |
| 317.98 | 0.831 | 6.81 | 1.21 | -- | -0.131 | -- | 1.97 | 0.16 | -- | 0.9028 | 9 | -- | -- |
| 154.42 | 0.583 | 6.88 | 0.97 | 1.79 | -- | 0.146 | -- | 0.107 | 18.7 | -- | -- | -- | -- |
| 154.47 | 0.582 | 6.88 | 0.967 | 1.79 | -- | -- | -- | 0.108 | 18.7 | -- | -- | -- | -- |
| 321.08 | 0.838 | 6.84 | 0.951 | -- | -0.131 | -- | -- | 0.0901 | -- | 4.681 | 2 | -- | -- |
| 175.42 | 0.62 | 6.89 | -- | 1.84 | -0.596 | -- | -- | 0.0707 | 18.5 | 4.681 | 2 | -- | -- |
| 321.32 | 0.838 | 6.85 | 0.927 | -- | -- | -- | -- | 0.0726 | -- | -- | -- | -- | -- |
| 179.14 | 0.626 | 6.91 | -- | 1.78 | -- | -- | -- | -1.84e-05 | 18.8 | -- | -- | -- | -- |
| 319.42 | 0.832 | 6.9 | -- | -- | 1.22 | -- | -- | -0.175 | -- | -13.12 | 459 | -- | -- |
| 343.98 | 0.866 | 6.87 | -- | -- | -- | -- | -- | -0.0302 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.85 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 21 |
| 2 | 134.98 | temperature | 15 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 21 | 136.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 33 | 136.61 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 65 | 137.27 | temperature | 15 | 10 | > th | dose dependent | sin | 0 | NA |
| 66 | 137.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 112 | 137.75 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 113 | 137.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 116 | 137.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 7 |
| 149 | 138.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 9 |
| 184 | 138.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 11 |
| 186 | 138.36 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 198 | 138.43 | temperature | 15 | 270 | > th | dose dependent | sin | 2 | NA |
| 238 | 138.69 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 13 |
| 244 | 138.73 | temperature | 25 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 247 | 138.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 12 |
| 268 | 138.85 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 305 | 139.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 15 |
| 329 | 139.06 | wind | 1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 330 | 139.06 | humidity | 80 | 270 | > th | dose independent | rect. | 8 | 6 |
| 350 | 139.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 19 |
| 370 | 139.20 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 371 | 139.20 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 455 | 139.47 | wind | 1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 555 | 139.74 | temperature | 25 | 10 | > th | dose dependent | rect. | 22 | 22 |
| 632 | 139.93 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 650 | 139.97 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 657 | 139.99 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 667 | 140.02 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 686 | 140.08 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 10 |
| 687 | 140.08 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 702 | 140.11 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 12 |
| 753 | 140.21 | humidity | 70 | 270 | > th | dose dependent | rect. | 8 | 6 |
| 761 | 140.23 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 783 | 140.29 | wind | 1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 796 | 140.31 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 801 | 140.31 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 834 | 140.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 875 | 140.46 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 876 | 140.46 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 885 | 140.48 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 898 | 140.50 | temperature | 25 | 30 | > th | dose dependent | rect. | 22 | 18 |
| 899 | 140.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 18 |
| 953 | 140.61 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 1 |
| 974 | 140.64 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 982 | 140.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 23 |