Os01g0886000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF179 family protein.
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Os01g0886000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF179 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.01 | 0.235 | 12.4 | 0.28 | 0.452 | -0.907 | -0.512 | 0.154 | 0.258 | 13.5 | 23.4 | 91 | -- | -- |
| 25.01 | 0.233 | 12.4 | 0.301 | 0.449 | -0.939 | -0.553 | -- | 0.264 | 13.6 | 23.22 | 84 | -- | -- |
| 25.69 | 0.236 | 12.4 | 0.215 | 0.457 | -0.851 | -- | 0.545 | 0.242 | 13.1 | 23.48 | 91 | -- | -- |
| 26.1 | 0.238 | 12.4 | 0.288 | 0.452 | -0.953 | -- | -- | 0.264 | 13.1 | 23.14 | 89 | -- | -- |
| 35.21 | 0.278 | 12.5 | 0.102 | -- | -1.01 | -- | 0.764 | 0.127 | -- | 27.24 | 71 | -- | -- |
| 35.79 | 0.28 | 12.4 | 0.504 | 0.576 | -- | -0.567 | -- | 0.393 | 13.5 | -- | -- | -- | -- |
| 36.97 | 0.285 | 12.4 | 0.485 | 0.575 | -- | -- | -- | 0.389 | 13.2 | -- | -- | -- | -- |
| 36.14 | 0.281 | 12.5 | 0.229 | -- | -1.04 | -- | -- | 0.156 | -- | 27 | 8 | -- | -- |
| 28.06 | 0.247 | 12.4 | -- | 0.428 | -0.986 | -- | -- | 0.239 | 13 | 23.3 | 88 | -- | -- |
| 57.47 | 0.354 | 12.4 | 0.462 | -- | -- | -- | -- | 0.377 | -- | -- | -- | -- | -- |
| 43.15 | 0.307 | 12.4 | -- | 0.567 | -- | -- | -- | 0.335 | 13.1 | -- | -- | -- | -- |
| 37.38 | 0.285 | 12.5 | -- | -- | -1.11 | -- | -- | 0.117 | -- | 27 | 8 | -- | -- |
| 63.11 | 0.371 | 12.4 | -- | -- | -- | -- | -- | 0.326 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.11 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 19 |
| 54 | 25.66 | temperature | 25.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 61 | 25.72 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 65 | 25.74 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 79 | 25.80 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 82 | 25.81 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 98 | 25.89 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 105 | 25.91 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 114 | 25.95 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 122 | 25.96 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 146 | 26.07 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 206 | 26.25 | temperature | 30.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 235 | 26.41 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 287 | 26.62 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 21 |
| 328 | 26.72 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 13 |
| 367 | 26.82 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 18 |
| 516 | 27.18 | temperature | 20.0 | 270 | < th | dose independent | rect. | 19 | 17 |
| 634 | 27.40 | temperature | 20.0 | 270 | > th | dose independent | rect. | 8 | 22 |
| 654 | 27.44 | temperature | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 707 | 27.53 | temperature | 20.0 | 10 | > th | dose independent | sin | 5 | NA |
| 758 | 27.60 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 769 | 27.62 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 11 |
| 837 | 27.74 | temperature | 20.0 | 10 | < th | dose independent | rect. | 18 | 19 |
| 838 | 27.74 | temperature | 10.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 915 | 27.86 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 17 |
| 978 | 27.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 981 | 27.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |