Os01g0882500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0882500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.33 | 0.33 | 13.5 | -0.765 | 1.03 | 0.473 | -0.267 | 1.26 | -0.734 | 23.2 | 1.183 | 2668 | -- | -- |
| 51.23 | 0.333 | 13.5 | -0.819 | 0.979 | 0.502 | -0.119 | -- | -0.762 | 23.2 | -0.01595 | 2668 | -- | -- |
| 49.61 | 0.328 | 13.5 | -0.77 | 1.03 | 0.482 | -- | 1.12 | -0.735 | 23.2 | 0.2131 | 2670 | -- | -- |
| 50.93 | 0.332 | 13.5 | -0.897 | 1.03 | 0.525 | -- | -- | -0.773 | 23.2 | -1.682e-06 | 2691 | -- | -- |
| 93.54 | 0.453 | 13.4 | -0.852 | -- | -1.17 | -- | -0.059 | -0.686 | -- | -16.99 | 2514 | -- | -- |
| 58.07 | 0.357 | 13.5 | -0.881 | 1.13 | -- | -0.0709 | -- | -0.683 | 23.2 | -- | -- | -- | -- |
| 58.09 | 0.357 | 13.5 | -0.878 | 1.13 | -- | -- | -- | -0.683 | 23.2 | -- | -- | -- | -- |
| 93.55 | 0.452 | 13.4 | -0.854 | -- | -1.17 | -- | -- | -0.686 | -- | -56.07 | 1120 | -- | -- |
| 67.57 | 0.383 | 13.5 | -- | 1 | 0.598 | -- | -- | -0.763 | 23.2 | 0.5989 | 9709 | -- | -- |
| 137.83 | 0.549 | 13.4 | -0.851 | -- | -- | -- | -- | -0.673 | -- | -- | -- | -- | -- |
| 78.4 | 0.414 | 13.4 | -- | 1.12 | -- | -- | -- | -0.585 | 23.1 | -- | -- | -- | -- |
| 112.78 | 0.496 | 13.4 | -- | -- | -1.17 | -- | -- | -0.592 | -- | -56.07 | 1120 | -- | -- |
| 156.91 | 0.585 | 13.4 | -- | -- | -- | -- | -- | -0.578 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.85 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 19 | 6 |
| 3 | 47.95 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 6 | 47.98 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 17 | 48.04 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 25 | 48.10 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 29 | 48.11 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 42 | 48.16 | humidity | 80.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 43 | 48.16 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 49 | 48.17 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 19 | 7 |
| 89 | 48.28 | humidity | 80.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 117 | 48.35 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 122 | 48.36 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 19 |
| 129 | 48.38 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 133 | 48.38 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 5 |
| 136 | 48.39 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 157 | 48.42 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 162 | 48.42 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 194 | 48.48 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 232 | 48.54 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 261 | 48.57 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 263 | 48.57 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 266 | 48.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 16 |
| 280 | 48.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 14 |
| 285 | 48.60 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 19 |
| 302 | 48.62 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 320 | 48.64 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 322 | 48.64 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 6 | 18 |
| 323 | 48.64 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 324 | 48.64 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 327 | 48.64 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 335 | 48.65 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 364 | 48.67 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 375 | 48.68 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 421 | 48.71 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 436 | 48.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 9 |
| 442 | 48.73 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 447 | 48.73 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 451 | 48.73 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 13 | 12 |
| 459 | 48.73 | radiation | 40.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 482 | 48.74 | radiation | 10.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 484 | 48.74 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 500 | 48.74 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 527 | 48.75 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 557 | 48.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 6 |
| 574 | 48.79 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 589 | 48.80 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 648 | 48.84 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 659 | 48.85 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 681 | 48.86 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 10 |
| 685 | 48.86 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 22 | 12 |
| 694 | 48.87 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 713 | 48.87 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 23 | NA |
| 716 | 48.87 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 726 | 48.87 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 727 | 48.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 17 |
| 730 | 48.88 | radiation | 10.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 770 | 48.89 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 789 | 48.90 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 841 | 48.92 | radiation | 40.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 842 | 48.92 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 878 | 48.92 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 19 |
| 880 | 48.93 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 950 | 48.94 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 986 | 48.95 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 13 | 1 |