Os01g0874700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : emp24/gp25L/p24 family protein.
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Os01g0874700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : emp24/gp25L/p24 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.81 | 0.335 | 11.3 | 1.44 | 0.559 | 0.697 | 0.325 | 1.15 | 0.186 | 21.8 | 994.6 | 4398 | -- | -- |
| 52.35 | 0.337 | 11.3 | 1.56 | 0.553 | 0.739 | 0.346 | -- | 0.202 | 21.8 | 994.8 | 4482 | -- | -- |
| 51.19 | 0.333 | 11.3 | 1.42 | 0.554 | 0.687 | -- | 1.17 | 0.189 | 21.9 | 994.7 | 4408 | -- | -- |
| 52.78 | 0.338 | 11.3 | 1.55 | 0.549 | 0.734 | -- | -- | 0.198 | 22 | 994.7 | 4445 | -- | -- |
| 69.78 | 0.389 | 11.3 | 1.44 | -- | 0.719 | -- | 1.08 | 0.185 | -- | 994.5 | 4414 | -- | -- |
| 61.23 | 0.367 | 11.3 | 1.42 | 0.565 | -- | 0.336 | -- | 0.266 | 21.7 | -- | -- | -- | -- |
| 61.62 | 0.368 | 11.3 | 1.41 | 0.562 | -- | -- | -- | 0.265 | 21.9 | -- | -- | -- | -- |
| 71.15 | 0.393 | 11.3 | 1.56 | -- | 0.754 | -- | -- | 0.204 | -- | 995.5 | 4463 | -- | -- |
| 112.69 | 0.497 | 11.4 | -- | 0.574 | 0.357 | -- | -- | 0.0587 | 22 | 990.3 | 10756 | -- | -- |
| 80.5 | 0.419 | 11.3 | 1.42 | -- | -- | -- | -- | 0.265 | -- | -- | -- | -- | -- |
| 114.04 | 0.5 | 11.4 | -- | 0.567 | -- | -- | -- | 0.108 | 22.1 | -- | -- | -- | -- |
| 116.88 | 0.504 | 11.4 | -- | -- | -0.773 | -- | -- | -0.0242 | -- | 995.6 | 47520 | -- | -- |
| 133.42 | 0.539 | 11.3 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.59 | humidity | 80 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 2 | 48.74 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 4 | 49.02 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 7 | 49.29 | radiation | 10 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 8 | 49.31 | radiation | 20 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 9 | 49.33 | radiation | 40 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 22 | 49.48 | radiation | 20 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 23 | 49.53 | temperature | 30 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 24 | 49.57 | radiation | 10 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 25 | 49.57 | temperature | 30 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 27 | 49.58 | radiation | 40 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 29 | 49.61 | radiation | 40 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 32 | 49.63 | temperature | 30 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 41 | 49.75 | radiation | 10 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 50 | 49.82 | radiation | 20 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 54 | 49.83 | radiation | 20 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 59 | 49.85 | humidity | 80 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 75 | 49.91 | radiation | 20 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 82 | 50.04 | radiation | 10 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 100 | 50.09 | radiation | 30 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 101 | 50.12 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 118 | 50.16 | atmosphere | 995 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 121 | 50.19 | atmosphere | 1015 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 126 | 50.23 | radiation | 40 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 127 | 50.24 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 129 | 50.26 | radiation | 10 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 131 | 50.26 | radiation | 10 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 137 | 50.27 | radiation | 10 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 139 | 50.27 | radiation | 10 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 140 | 50.27 | radiation | 10 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 165 | 50.29 | atmosphere | 1015 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 172 | 50.31 | radiation | 20 | 14400 | < th | dose independent | sin | 9 | NA |
| 184 | 50.32 | radiation | 40 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 187 | 50.32 | radiation | 40 | 14400 | < th | dose independent | rect. | 3 | 8 |
| 197 | 50.32 | radiation | 40 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 207 | 50.33 | radiation | 40 | 14400 | < th | dose independent | rect. | 18 | 17 |
| 249 | 50.34 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 338 | 50.45 | radiation | 10 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 436 | 50.51 | atmosphere | 995 | 4320 | > th | dose dependent | sin | 20 | NA |
| 528 | 50.56 | atmosphere | 1015 | 4320 | < th | dose dependent | sin | 20 | NA |
| 647 | 50.63 | radiation | 10 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 666 | 50.64 | radiation | 20 | 14400 | > th | dose independent | sin | 9 | NA |
| 823 | 50.70 | radiation | 40 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 877 | 50.72 | radiation | 20 | 14400 | < th | dose independent | rect. | 12 | 22 |
| 974 | 50.75 | radiation | 1 | 14400 | > th | dose dependent | rect. | 12 | 2 |