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Os01g0866300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to VAMP-like protein YKT61 (AtYKT61) (Geranylgeranylated protein 1) (AtGP1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0135) R2 : 0.407
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.532 (0.0331) R2dC : 0.335 R2C : 0.323
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.202 (0.0284) R2dN8 : 0.0848 R2N8 : 0.0725
σ : 0.255
deviance : 29.63
__
_____
C
peak time of C : 2.39
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.14 0.216 12.5 -0.269 0.629 -0.659 -0.0646 0.822 0.075 2.14 23.44 19 -- --
21.67 0.218 12.5 -0.166 0.642 -0.806 0.183 -- 0.1 2.13 22.82 22 -- --
21.06 0.215 12.5 -0.25 0.63 -0.685 -- 0.736 0.0825 2.13 23.1 13 -- --
21.77 0.219 12.5 -0.17 0.64 -0.832 -- -- 0.103 2.12 22.5 21 -- --
42.16 0.302 12.5 -0.154 -- -0.26 -- 1.24 0.157 -- 21.4 24 -- --
29.45 0.254 12.5 -0.0059 0.532 -- 0.221 -- 0.202 2.41 -- -- -- --
29.63 0.255 12.5 -0.0118 0.532 -- -- -- 0.201 2.39 -- -- -- --
39.6 0.293 12.5 -0.189 -- -0.628 -- -- 0.0595 -- 22.97 2547 -- --
22.45 0.222 12.5 -- 0.629 -0.766 -- -- 0.129 2.13 22.5 9 -- --
46.36 0.318 12.5 0.0107 -- -- -- -- 0.214 -- -- -- -- --
29.63 0.255 12.5 -- 0.532 -- -- -- 0.202 2.39 -- -- -- --
40.59 0.297 12.5 -- -- -0.492 -- -- 0.105 -- 26.92 2493 -- --
46.37 0.318 12.5 -- -- -- -- -- 0.212 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.15 temperature 15 10 > th dose dependent sin 10 NA
2 20.17 temperature 25 10 < th dose dependent sin 12 NA
23 20.51 temperature 25 270 < th dose dependent rect. 11 17
35 20.70 temperature 25 90 < th dose dependent rect. 17 12
37 20.71 temperature 25 10 < th dose dependent rect. 12 18
40 20.76 humidity 90 14400 > th dose dependent rect. 24 13
41 20.76 temperature 25 90 < th dose dependent rect. 15 14
46 20.78 temperature 25 10 < th dose dependent rect. 12 20
55 20.81 temperature 25 90 < th dose dependent rect. 13 16
58 20.82 temperature 25 10 < th dose dependent rect. 18 12
77 20.86 temperature 25 10 < th dose dependent rect. 16 14
82 20.88 temperature 25 90 < th dose dependent rect. 11 22
85 20.89 humidity 90 14400 > th dose dependent sin 7 NA
86 20.89 humidity 90 14400 > th dose dependent rect. 2 8
91 20.90 temperature 25 90 < th dose dependent rect. 19 10
119 20.95 temperature 25 10 < th dose dependent rect. 14 16
120 20.95 temperature 25 10 < th dose dependent rect. 16 16
182 21.07 humidity 90 14400 > th dose dependent rect. 15 15
270 21.18 humidity 90 14400 > th dose dependent rect. 19 9
286 21.20 humidity 90 14400 > th dose dependent rect. 21 6
294 21.21 temperature 20 270 > th dose dependent rect. 16 15
383 21.36 humidity 90 14400 > th dose dependent rect. 5 1
423 21.42 humidity 90 14400 > th dose dependent rect. 23 2
471 21.47 temperature 25 10 < th dose dependent rect. 10 22
506 21.52 humidity 90 14400 > th dose dependent rect. 4 3
511 21.53 temperature 20 30 > th dose independent rect. 17 15
578 21.63 temperature 20 30 > th dose independent rect. 9 23
583 21.64 radiation 1 14400 < th dose dependent rect. 4 1
584 21.64 radiation 1 14400 < th dose dependent rect. 2 3
599 21.67 wind 1 43200 < th dose dependent rect. 11 1
616 21.69 humidity 90 14400 > th dose dependent no NA NA
633 21.73 wind 3 43200 > th dose independent rect. 13 1
642 21.73 temperature 25 10 < th dose dependent rect. 7 23
644 21.73 temperature 25 10 < th dose dependent rect. 19 23
650 21.74 temperature 25 10 < th dose dependent rect. 17 23
651 21.75 wind 3 43200 < th dose independent rect. 13 1
652 21.75 temperature 25 10 < th dose dependent no NA NA
668 21.77 temperature 25 10 < th dose dependent rect. 3 23
669 21.77 temperature 25 10 < th dose dependent rect. 5 23
670 21.77 temperature 25 10 < th dose dependent rect. 21 23
676 21.78 temperature 25 10 < th dose dependent rect. 23 23
686 21.80 temperature 15 270 > th dose dependent rect. 13 22
693 21.82 temperature 30 720 < th dose dependent rect. 3 21
696 21.83 radiation 1 14400 > th dose independent rect. 18 1
726 21.85 radiation 1 14400 < th dose dependent rect. 22 7
742 21.87 wind 1 43200 > th dose independent rect. 9 2
772 21.89 temperature 15 270 > th dose dependent rect. 14 20
800 21.93 humidity 70 43200 > th dose independent rect. 24 11
838 21.96 temperature 25 30 < th dose dependent rect. 1 23
840 21.97 temperature 20 30 > th dose independent sin 14 NA
841 21.97 humidity 90 14400 > th dose independent rect. 23 1
842 21.97 humidity 70 43200 < th dose independent rect. 23 12
882 22.00 temperature 20 90 < th dose independent rect. 11 18
883 22.00 temperature 25 720 < th dose dependent rect. 19 2
884 22.00 temperature 15 720 > th dose dependent rect. 16 9
901 22.02 temperature 20 30 > th dose independent sin 11 NA
903 22.02 wind 3 43200 < th dose independent rect. 12 3
911 22.02 temperature 25 720 < th dose dependent rect. 17 5
919 22.03 wind 1 43200 > th dose independent rect. 2 1
920 22.03 humidity 90 14400 > th dose independent rect. 19 9
938 22.04 radiation 40 43200 < th dose dependent rect. 24 5
941 22.04 humidity 80 43200 < th dose dependent rect. 1 11
993 22.07 temperature 10 1440 > th dose dependent rect. 17 18
998 22.08 humidity 70 43200 < th dose independent sin 7 NA
999 22.08 wind 1 43200 > th dose independent rect. 11 1