BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0866300 Os01g0866300|AK068786
(251 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G58060.2 | chr5:23498277-23500128 FORWARD LENGTH=222 281 2e-76
AT5G58180.1 | chr5:23544011-23545157 FORWARD LENGTH=200 266 8e-72
AT2G25340.1 | chr2:10792664-10793832 REVERSE LENGTH=220 52 3e-07
AT4G32150.1 | chr4:15526407-15527651 REVERSE LENGTH=220 51 4e-07
AT1G11890.1 | chr1:4011509-4012835 FORWARD LENGTH=219 51 6e-07
AT5G22360.1 | chr5:7404379-7405654 REVERSE LENGTH=222 50 2e-06
AT5G11150.1 | chr5:3546625-3547844 REVERSE LENGTH=222 49 2e-06
AT1G04760.1 | chr1:1334760-1336070 FORWARD LENGTH=221 47 8e-06
AT2G32670.1 | chr2:13857941-13859346 FORWARD LENGTH=286 47 9e-06
>AT5G58060.2 | chr5:23498277-23500128 FORWARD LENGTH=222
Length = 221
Score = 281 bits (719), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/241 (62%), Positives = 168/241 (69%), Gaps = 45/241 (18%)
Query: 36 MKITALLVLKPXXXXXXXXXXXXXXXXXXPEA---VVLANATDVSHFGFFQRGAAREFIV 92
MKITALLVLK PEA V+L+NA+DVSHFG+FQR + +EF+V
Sbjct: 1 MKITALLVLK-----------------CAPEASDPVILSNASDVSHFGYFQRSSVKEFVV 43
Query: 93 FVARTVAQRTQPGQRQSVQHEEYK----------------------VHSHNRNGLCAVAF 130
FV RTVA RT P QRQSVQHE VH++NRNGLCAV F
Sbjct: 44 FVGRTVASRTPPSQRQSVQHEGCAPFLILDLPGLCPGFNFLRFYLIVHAYNRNGLCAVGF 103
Query: 131 MDDHYPVRSAFSLLNKVLDEYQKAFGDSXXXXXXXXXXXXXXXPFLTDALTKFQDPAEAD 190
MDDHYPVRSAFSLLN+VLDEYQK+FG+S P+LT+AL KFQDPAEAD
Sbjct: 104 MDDHYPVRSAFSLLNQVLDEYQKSFGESWRSAKEDSNQPW---PYLTEALNKFQDPAEAD 160
Query: 191 KLMKIQRDLDETKIILHKTIESVLQRGERLDSLVEKSSDLSAASQMFYKQAKKTNQCCTI 250
KL+KIQR+LDETKIILHKTI+SVL RGE+LDSLVEKSSDLS ASQMFYKQAKKTN CCTI
Sbjct: 161 KLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSMASQMFYKQAKKTNSCCTI 220
Query: 251 L 251
L
Sbjct: 221 L 221
>AT5G58180.1 | chr5:23544011-23545157 FORWARD LENGTH=200
Length = 199
Score = 266 bits (680), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 160/218 (73%), Gaps = 21/218 (9%)
Query: 36 MKITALLVLKPXXXXXXXXXXXXXXXXXXPEAVVLANATDVSHFGFFQ--RGAAREFIVF 93
MKITALLVLK E V+LAN +D+S FG F R EFIVF
Sbjct: 1 MKITALLVLKCDPETR--------------EPVILANVSDLSQFGKFSFYRSNFEEFIVF 46
Query: 94 VARTVAQRTQPGQRQSVQHEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNKVLDEYQK 153
+ARTVA+RT PGQRQSV+HEEYKVH++N NGLCAV FMDDHYPVRSAFSLLN+VLD YQK
Sbjct: 47 IARTVARRTPPGQRQSVKHEEYKVHAYNINGLCAVGFMDDHYPVRSAFSLLNQVLDVYQK 106
Query: 154 AFGDSXXXXXXXXXXXXXXXPFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTIESV 213
+GD+ P+L +A KF+DPAEADKL+KIQR+LDETKIILHKTI+ V
Sbjct: 107 DYGDTWRFENSSQPW-----PYLKEASDKFRDPAEADKLLKIQRELDETKIILHKTIDGV 161
Query: 214 LQRGERLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL 251
L RGE+LDSLVEKSS+LS AS+MFYKQAKKTN CCT+L
Sbjct: 162 LARGEKLDSLVEKSSELSLASKMFYKQAKKTNSCCTLL 199
>AT2G25340.1 | chr2:10792664-10793832 REVERSE LENGTH=220
Length = 219
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 109 SVQHEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNKVLDEYQKAFGDSXXXXXXXXXX 168
S + Y H +GL + D+ R FS L + + + +G +
Sbjct: 45 SYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMN 104
Query: 169 XXXXXPFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTIESVLQRGERLDSLVEKSS 228
L + + + AD + +I+ ++++ + ++ + I+++L RGERL+ LV+K++
Sbjct: 105 DEFSR-VLNQQIEYYSNDPNADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTA 163
Query: 229 DLSAASQMFYKQAKKTNQ 246
++ + F KQ ++ N
Sbjct: 164 NMQGNTFRFRKQTRRFNN 181
>AT4G32150.1 | chr4:15526407-15527651 REVERSE LENGTH=220
Length = 219
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 109 SVQHEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNKVLDEYQKAFGDSXXXXXXXXXX 168
S + Y H +GL + ++ R F+ L + + + +G +
Sbjct: 45 SYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAMN 104
Query: 169 XXXXXPFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTIESVLQRGERLDSLVEKSS 228
L+ + + + AD++ +I+ ++++ + ++ + I+ VL RGERL+ LV+K++
Sbjct: 105 EEFSR-VLSQQIDYYSNDPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTA 163
Query: 229 DLSAASQMFYKQAKK 243
++ + F KQA++
Sbjct: 164 NMQGNTFRFRKQARR 178
>AT1G11890.1 | chr1:4011509-4012835 FORWARD LENGTH=219
Length = 218
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 107 RQSVQHEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNKVLDEYQKAFGDSXXXXXXXX 166
R SV+ Y H +C + D YP + AF L + +E+++ G +
Sbjct: 52 RMSVETGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPY 111
Query: 167 XXXXXXXPFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTIESVLQRGERLDSLVEK 226
F+ +QD + K+ +L E I+ + ++ VL GE+LD + E
Sbjct: 112 AFIKFDT-FIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEM 170
Query: 227 SSDLSAASQMFYKQAKKTNQCCTI 250
SS L++ S+++ +AK N+ I
Sbjct: 171 SSRLTSESRIYADKAKDLNRQALI 194
>AT5G22360.1 | chr5:7404379-7405654 REVERSE LENGTH=222
Length = 221
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 94 VARTVAQRTQP---GQRQSVQHEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNKVLDE 150
V R + ++ P +R + Y H +GL + +D + R FS L ++
Sbjct: 28 VVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMR 87
Query: 151 YQKAFGDSXXXXXXXXXXXXXXXPFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTI 210
+ K +G L + F D L +++ ++ E + ++ + I
Sbjct: 88 FMKNYGK-VAHNAPAYAMNDEFSRVLHQQMEFFSSNPSVDTLNRVRGEVSEIRSVMVENI 146
Query: 211 ESVLQRGERLDSLVEKSSDLSAASQMFYKQAKK 243
E +++RG+R++ LV+K++ + +S F KQ+K+
Sbjct: 147 EKIMERGDRIELLVDKTATMQDSSFHFRKQSKR 179
>AT5G11150.1 | chr5:3546625-3547844 REVERSE LENGTH=222
Length = 221
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 109 SVQHEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNKVLDEYQKAFGDSXXXXXXXXXX 168
S + Y H +GL + D+ F+ L+ + + K +G +
Sbjct: 46 SYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMN 105
Query: 169 XXXXXPFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTIESVLQRGERLDSLVEKSS 228
L+ + + + AD++ +I+ ++ + + ++ + I+ VL RGERL+ LV+K+
Sbjct: 106 DEFSR-VLSQQMEFYSNDPNADRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTE 164
Query: 229 DLSAASQMFYKQAKK 243
++ + F KQA++
Sbjct: 165 NMQGNTFRFRKQARR 179
>AT1G04760.1 | chr1:1334760-1336070 FORWARD LENGTH=221
Length = 220
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 115 YKVHSHNRNGLCAVAFMDDHYPVRSA-----FSLLNKVLDEYQKAFGDSXXXXXXXXXXX 169
Y H N L F + SA + L +V +++ K +G
Sbjct: 48 YNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLN 107
Query: 170 XXXXPFLTDALTKFQD-PAEADKLMKIQRDLDETKIILHKTIESVLQRGERLDSLVEKSS 228
L + + D P E KL K++ + E K ++ + IE VL RGE+++ LV+K+
Sbjct: 108 KEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTE 167
Query: 229 DLSAASQMFYKQAKK 243
+L + +Q F Q K
Sbjct: 168 NLRSQAQDFRTQGTK 182
>AT2G32670.1 | chr2:13857941-13859346 FORWARD LENGTH=286
Length = 285
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 118 HSHN---RNGL--CAVAFMDDHYPVRSAFSLLNKVLDEYQKAFGDSXXXXXXXXXXXXXX 172
H+ N NG C VA + AF L +V +++ K +G
Sbjct: 118 HTFNYLVENGFTYCVVAVESVGRQIPMAF--LERVKEDFNKRYGGGKATTAQANSLNREF 175
Query: 173 XPFLTDALTKFQD-PAEADKLMKIQRDLDETKIILHKTIESVLQRGERLDSLVEKSSDLS 231
L + + D P E KL K++ + E K ++ + IE VL RGE+++ LV+K+ +L
Sbjct: 176 GSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLR 235
Query: 232 AASQMFYKQAKK 243
+ +Q F Q K
Sbjct: 236 SQAQDFRTQGTK 247
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,559,663
Number of extensions: 106171
Number of successful extensions: 311
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 305
Number of HSP's successfully gapped: 9
Length of query: 251
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 155
Effective length of database: 8,474,633
Effective search space: 1313568115
Effective search space used: 1313568115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)