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Os01g0864700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.74 (0.0288) R2 : 0.373
β1 : -1.71 (0.105) R2dD : 0.374 R2D : 0.373
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00978 (0.0614) R2dN8 : 4.68e-05 R2N8 : -0.00136
σ : 0.54
deviance : 133.45
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
105.68 0.483 8.73 -1.65 0.563 0.0925 0.651 -2.11 -0.0126 5.02 18.95 20 -- --
111.38 0.492 8.73 -1.81 0.513 0.392 1.18 -- -0.0386 4.17 55.46 9 -- --
106.42 0.48 8.72 -1.64 0.563 0.0479 -- -2.4 -0.014 5 19.57 43 -- --
110.83 0.49 8.74 -1.6 0.564 1.09 -- -- -5.6e-05 4.49 57.15 9 -- --
116.27 0.502 8.73 -1.73 -- -0.481 -- -2.12 0.00388 -- -27.02 378 -- --
114.87 0.502 8.73 -1.72 0.534 -- 1.07 -- -0.0184 4.65 -- -- -- --
117.58 0.508 8.73 -1.72 0.55 -- -- -- -0.0237 5.14 -- -- -- --
122.81 0.516 8.73 -1.69 -- -0.557 -- -- 0.0337 -- -27.08 518 -- --
174.7 0.616 8.68 -- 0.593 2.12 -- -- 0.22 4.28 58.02 162 -- --
133.45 0.54 8.74 -1.71 -- -- -- -- -0.00978 -- -- -- -- --
196 0.655 8.69 -- 0.521 -- -- -- 0.168 5.25 -- -- -- --
191.05 0.644 8.69 -- -- 2.06 -- -- 0.217 -- 67.64 269 -- --
210.16 0.677 8.69 -- -- -- -- -- 0.179 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.74 wind 1.0 14400 > th dose independent rect. 7 5
2 101.88 radiation 20.0 30 > th dose independent rect. 7 5
19 101.94 wind 1.0 14400 > th dose independent rect. 7 2
20 102.22 radiation 10.0 10 > th dose dependent rect. 16 20
21 102.27 radiation 10.0 10 > th dose dependent rect. 7 5
36 102.30 wind 1.0 14400 < th dose independent rect. 7 5
55 102.47 wind 1.0 14400 < th dose dependent rect. 6 16
57 102.48 wind 1.0 14400 < th dose independent rect. 24 2
58 102.48 humidity 80.0 43200 > th dose independent rect. 13 10
59 102.49 wind 7.0 4320 > th dose dependent rect. 22 5
74 102.57 wind 1.0 14400 < th dose dependent rect. 7 5
76 102.60 wind 1.0 14400 < th dose independent rect. 7 2
78 102.63 wind 1.0 14400 > th dose independent rect. 24 2
83 102.68 humidity 80.0 43200 < th dose independent rect. 13 10
84 102.69 wind 1.0 14400 < th dose dependent rect. 7 2
87 102.71 radiation 40.0 30 < th dose dependent sin 6 NA
100 102.72 wind 1.0 14400 < th dose dependent rect. 6 21
111 102.80 wind 1.0 14400 > th dose independent rect. 5 17
112 102.82 wind 1.0 14400 > th dose independent rect. 6 12
113 102.82 wind 1.0 14400 > th dose independent rect. 6 14
114 102.82 wind 1.0 14400 > th dose independent rect. 6 22
115 102.82 wind 1.0 14400 < th dose dependent rect. 24 22
118 102.83 wind 1.0 14400 < th dose dependent rect. 6 14
140 102.91 wind 1.0 14400 < th dose dependent rect. 6 12
141 102.91 humidity 90.0 30 < th dose dependent rect. 18 18
163 102.96 wind 1.0 14400 > th dose independent sin 1 NA
186 103.00 wind 1.0 14400 > th dose independent rect. 24 22
187 103.00 wind 1.0 14400 < th dose dependent rect. 24 3
188 103.01 wind 1.0 14400 < th dose independent rect. 5 17
192 103.03 wind 1.0 14400 < th dose dependent rect. 14 22
197 103.06 temperature 25.0 43200 > th dose dependent rect. 3 1
198 103.06 wind 1.0 14400 < th dose dependent rect. 24 20
204 103.09 temperature 25.0 43200 > th dose dependent rect. 1 3
210 103.11 temperature 30.0 43200 > th dose dependent rect. 18 1
228 103.12 temperature 25.0 43200 > th dose dependent rect. 22 6
230 103.14 temperature 30.0 43200 > th dose independent rect. 18 1
271 103.16 humidity 80.0 43200 > th dose dependent rect. 6 1
272 103.16 radiation 10.0 43200 < th dose dependent rect. 11 3
288 103.19 temperature 25.0 43200 > th dose dependent rect. 22 1
313 103.22 wind 7.0 4320 > th dose independent rect. 22 5
318 103.24 wind 1.0 14400 < th dose independent rect. 6 12
325 103.25 humidity 80.0 43200 > th dose independent sin 19 NA
331 103.27 wind 1.0 14400 < th dose independent rect. 6 21
344 103.30 wind 1.0 14400 < th dose independent rect. 24 22
352 103.32 wind 1.0 14400 > th dose independent rect. 14 22
360 103.34 humidity 80.0 43200 > th dose independent rect. 6 17
374 103.36 wind 1.0 14400 < th dose dependent sin 1 NA
386 103.39 humidity 80.0 43200 < th dose independent sin 19 NA
388 103.39 radiation 10.0 43200 < th dose dependent rect. 13 1
389 103.40 wind 1.0 14400 < th dose independent sin 1 NA
398 103.42 humidity 80.0 43200 < th dose independent rect. 6 17
430 103.47 wind 9.0 43200 > th dose independent rect. 15 1
456 103.51 wind 5.0 43200 > th dose independent rect. 24 1
461 103.52 temperature 25.0 43200 > th dose independent rect. 23 1
464 103.52 wind 1.0 14400 < th dose dependent rect. 21 23
474 103.54 wind 1.0 14400 < th dose dependent no NA NA
479 103.54 wind 1.0 14400 < th dose dependent rect. 19 23
480 103.55 humidity 90.0 43200 < th dose independent rect. 14 1
484 103.55 wind 1.0 14400 < th dose dependent rect. 10 23
485 103.55 wind 1.0 14400 < th dose dependent rect. 17 23
519 103.60 wind 1.0 14400 < th dose independent rect. 14 22
526 103.61 temperature 30.0 43200 < th dose independent rect. 18 1
530 103.61 temperature 30.0 43200 < th dose independent rect. 18 13
556 103.64 wind 5.0 43200 < th dose independent rect. 24 2
561 103.64 temperature 30.0 43200 < th dose independent rect. 18 11
566 103.64 wind 1.0 14400 > th dose independent rect. 17 23
574 103.65 temperature 30.0 43200 < th dose independent rect. 18 9
581 103.65 humidity 70.0 43200 > th dose dependent rect. 13 9
582 103.66 wind 1.0 14400 > th dose independent no NA NA
585 103.66 humidity 70.0 43200 > th dose dependent rect. 12 11
593 103.67 wind 1.0 14400 > th dose independent rect. 19 23
613 103.69 humidity 80.0 43200 > th dose dependent rect. 5 3
632 103.71 temperature 25.0 43200 < th dose independent rect. 23 2
638 103.71 humidity 70.0 43200 > th dose dependent rect. 14 7
656 103.73 wind 7.0 4320 < th dose independent rect. 22 5
659 103.73 wind 1.0 14400 > th dose independent rect. 21 23
726 103.79 humidity 70.0 43200 > th dose independent rect. 13 1
743 103.79 humidity 90.0 10 < th dose dependent rect. 5 7
805 103.84 wind 9.0 43200 > th dose dependent rect. 15 2
833 103.86 wind 3.0 43200 < th dose independent rect. 15 1
847 103.87 wind 1.0 14400 > th dose independent rect. 10 23
873 103.88 humidity 90.0 30 < th dose dependent rect. 24 12
881 103.89 radiation 10.0 43200 < th dose dependent rect. 9 8
916 103.90 humidity 90.0 30 < th dose dependent rect. 22 14
921 103.91 wind 3.0 43200 > th dose independent rect. 15 1
931 103.91 humidity 70.0 43200 > th dose dependent rect. 4 17
943 103.93 precipitation 0.1 43200 < th dose independent rect. 1 1
946 103.93 humidity 80.0 43200 > th dose independent rect. 17 3
961 103.93 precipitation 0.1 43200 < th dose dependent rect. 1 1
969 103.94 humidity 70.0 43200 > th dose independent rect. 15 1
970 103.94 temperature 25.0 43200 < th dose independent rect. 23 5
971 103.94 temperature 25.0 43200 > th dose independent rect. 22 6
983 103.95 atmosphere 1015.0 43200 < th dose independent rect. 10 1
998 103.96 precipitation 0.1 43200 > th dose independent rect. 1 1