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Os01g0858700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.79 (0.0231) R2 : 0.704
β1 : 1.04 (0.0858) R2dD : 0.102 R2D : 0.122
β2 : 1.11 (0.0671) R2dC : 0.222 R2C : 0.384
β3 : 1.41 (0.0968) R2dE : 0.181 R2E : 0.39
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0993 (0.0506) R2dN8 : 0.00394 R2N8 : 0.0021
σ : 0.431
deviance : 85.7
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C
peak time of C : 17.7
E
wheather : temperature
threshold : 24.1
memory length : 12
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
81.31 0.424 6.82 0.821 1.11 1.5 1.3 -1.87 0.0396 17.6 24.2 15 -- --
82.96 0.424 6.79 1.05 1.12 1.36 1.08 -- 0.108 17.7 24.1 12 -- --
85.11 0.43 6.81 0.867 1.09 1.54 -- -1.34 0.0495 17.7 24.2 14 -- --
85.7 0.431 6.79 1.04 1.11 1.41 -- -- 0.0993 17.7 24.1 12 -- --
119.85 0.51 6.81 0.607 -- 2.33 -- -2.09 -0.0507 -- 24.2 166 -- --
110.97 0.494 6.75 1.27 1.57 -- 1.48 -- 0.27 16.8 -- -- -- --
116.7 0.506 6.75 1.28 1.58 -- -- -- 0.277 16.8 -- -- -- --
122.06 0.515 6.78 0.876 -- 2.17 -- -- 0.0243 -- 24.2 166 -- --
111.97 0.493 6.83 -- 1.08 1.67 -- -- -0.101 18 22.01 13 -- --
249.54 0.738 6.73 1.22 -- -- -- -- 0.236 -- -- -- -- --
159.84 0.591 6.78 -- 1.56 -- -- -- 0.135 16.8 -- -- -- --
141.72 0.554 6.81 -- -- 2.29 -- -- -0.0917 -- 24.1 196 -- --
288.78 0.793 6.76 -- -- -- -- -- 0.101 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 79.06 temperature 20 720 > th dose dependent rect. 5 4
3 79.61 temperature 20 90 > th dose dependent rect. 5 22
11 80.65 temperature 15 270 > th dose dependent sin 2 NA
15 80.76 temperature 25 10 > th dose dependent rect. 6 16
17 80.85 temperature 20 720 > th dose dependent sin 6 NA
20 80.92 temperature 20 90 > th dose dependent rect. 5 16
31 81.01 temperature 20 10 > th dose dependent rect. 6 22
44 81.21 temperature 20 720 > th dose dependent rect. 6 1
59 81.30 temperature 20 720 > th dose independent rect. 22 9
82 81.47 temperature 15 720 > th dose dependent rect. 23 16
88 81.51 temperature 15 270 > th dose dependent rect. 5 12
129 81.72 temperature 30 720 < th dose dependent rect. 1 12
130 81.72 temperature 20 720 > th dose dependent rect. 23 14
133 81.74 temperature 30 720 < th dose dependent rect. 2 10
161 81.84 temperature 25 10 > th dose dependent no NA NA
186 82.00 temperature 20 720 > th dose dependent rect. 23 12
189 82.00 temperature 25 10 > th dose dependent rect. 21 23
260 82.43 temperature 25 30 > th dose dependent rect. 19 23
298 82.67 temperature 30 270 < th dose dependent rect. 24 21
328 82.84 temperature 20 4320 < th dose independent rect. 17 7
346 82.91 temperature 25 10 > th dose dependent rect. 17 23
347 82.92 temperature 20 4320 > th dose independent rect. 17 8
478 83.36 temperature 25 10 > th dose dependent rect. 8 23
531 83.54 temperature 30 720 < th dose dependent sin 4 NA
579 83.67 temperature 20 720 > th dose independent sin 8 NA
605 83.75 temperature 20 720 > th dose independent rect. 4 3
632 83.86 temperature 30 270 < th dose dependent sin 1 NA
642 83.90 temperature 20 4320 > th dose independent sin 16 NA
669 84.02 temperature 20 4320 < th dose independent sin 16 NA
873 84.69 temperature 20 1440 < th dose independent rect. 1 6
949 84.87 temperature 20 270 > th dose dependent rect. 17 23
997 85.00 temperature 20 720 > th dose independent rect. 22 17