Os01g0857500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Xanthine/uracil/vitamin C permease family protein.
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Os01g0857500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Xanthine/uracil/vitamin C permease family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 223.93 | 0.703 | 10.7 | -1.56 | 2.15 | -2 | -0.195 | 1.86 | -0.724 | 23.7 | 18.25 | 95 | 23.7 | -- |
| 230.36 | 0.707 | 10.7 | -1.61 | 1.89 | -1.85 | 0.286 | -- | -0.722 | 23.1 | 16.16 | 115 | 22.6 | -- |
| 223.94 | 0.697 | 10.7 | -1.55 | 2.09 | -1.97 | -- | 1.81 | -0.714 | 23.6 | 18.32 | 98 | 23.5 | -- |
| 230.44 | 0.707 | 10.7 | -1.61 | 1.87 | -1.84 | -- | -- | -0.717 | 23.1 | 16.78 | 110 | 22.6 | -- |
| 257.05 | 0.747 | 10.7 | -1.51 | -- | -2.6 | -- | 1.56 | -0.664 | -- | 122.8 | 167 | 22.3 | -- |
| 274.28 | 0.776 | 10.8 | -1.62 | 2.29 | -- | -0.8 | -- | -0.677 | 20.5 | -- | -- | -- | -- |
| 276.29 | 0.778 | 10.8 | -1.6 | 2.29 | -- | -- | -- | -0.678 | 20.6 | -- | -- | -- | -- |
| 247.21 | 0.732 | 10.7 | -1.6 | -- | -2.81 | -- | -- | -0.678 | -- | 97.35 | 56 | 21.1 | -- |
| 297.83 | 0.804 | 10.7 | -- | 1.91 | -1.8 | -- | -- | -0.533 | 22.2 | 10 | 100 | 21.3 | -- |
| 570.42 | 1.12 | 10.7 | -1.61 | -- | -- | -- | -- | -0.698 | -- | -- | -- | -- | -- |
| 343.68 | 0.867 | 10.7 | -- | 2.29 | -- | -- | -- | -0.5 | 20.5 | -- | -- | -- | -- |
| 313.17 | 0.824 | 10.7 | -- | -- | -2.8 | -- | -- | -0.525 | -- | 98.06 | 55 | 21.1 | -- |
| 638.49 | 1.18 | 10.7 | -- | -- | -- | -- | -- | -0.52 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 214.13 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 5 | 220.36 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 6 | 221.11 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 8 | 221.60 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 10 | 221.92 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 13 | 222.81 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 2 |
| 19 | 223.92 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 23 | 224.10 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 18 |
| 24 | 224.20 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 19 |
| 26 | 224.40 | radiation | 20.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 37 | 225.14 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 41 | 225.69 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 13 |
| 50 | 226.45 | radiation | 1.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 51 | 226.47 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 11 |
| 52 | 226.48 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 54 | 226.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 13 |
| 55 | 226.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 58 | 226.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 10 |
| 59 | 226.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 60 | 226.69 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 62 | 226.73 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 64 | 226.80 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 10 | 10 |
| 65 | 226.85 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 74 | 227.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 76 | 227.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 93 | 227.86 | radiation | 30.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 95 | 227.91 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 10 | 20 |
| 96 | 227.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 14 |
| 98 | 227.97 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 22 | 14 |
| 99 | 227.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 118 | 228.50 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 22 |
| 120 | 228.50 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 22 |
| 122 | 228.52 | radiation | 1.0 | 270 | < th | dose independent | sin | 6 | NA |
| 140 | 228.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 141 | 228.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 14 |
| 142 | 228.79 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 145 | 228.83 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 146 | 228.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 154 | 228.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 156 | 228.95 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 157 | 228.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 160 | 228.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 161 | 228.95 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 165 | 228.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 168 | 228.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 193 | 229.07 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 203 | 229.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 204 | 229.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 205 | 229.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 222 | 229.43 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 225 | 229.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 227 | 229.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 228 | 229.48 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 229 | 229.48 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 232 | 229.48 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 236 | 229.48 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 241 | 229.48 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 242 | 229.48 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 243 | 229.48 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 20 |
| 246 | 229.50 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 260 | 229.78 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 263 | 229.87 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 272 | 230.02 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 273 | 230.02 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 275 | 230.02 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 276 | 230.02 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 279 | 230.02 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 280 | 230.02 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 307 | 230.25 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 308 | 230.25 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 315 | 230.38 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 324 | 230.50 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 15 |
| 362 | 230.74 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 365 | 230.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 14 |
| 366 | 230.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 380 | 231.04 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 381 | 231.05 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 391 | 231.29 | radiation | 1.0 | 270 | > th | dose independent | sin | 5 | NA |
| 427 | 231.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 460 | 231.75 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 464 | 231.76 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 14 |
| 489 | 231.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 4 |
| 491 | 231.98 | temperature | 10.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 494 | 232.01 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 509 | 232.13 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 514 | 232.16 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 515 | 232.18 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 12 | 10 |
| 523 | 232.31 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 526 | 232.40 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 20 |
| 528 | 232.40 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 529 | 232.43 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 551 | 232.63 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 581 | 232.93 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 7 | 18 |
| 586 | 232.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 601 | 233.14 | wind | 9.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 606 | 233.16 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 627 | 233.19 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 2 |
| 634 | 233.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 23 |
| 635 | 233.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 636 | 233.24 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 652 | 233.37 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 666 | 233.49 | radiation | 20.0 | 30 | < th | dose independent | sin | 8 | NA |
| 687 | 233.64 | humidity | 50.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 691 | 233.68 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 4 |
| 694 | 233.70 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 695 | 233.70 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 697 | 233.70 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 698 | 233.70 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 701 | 233.70 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 702 | 233.70 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 703 | 233.70 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 706 | 233.70 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 708 | 233.72 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 10 |
| 712 | 233.76 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 15 |
| 714 | 233.78 | wind | 1.0 | 30 | > th | dose independent | rect. | 1 | 6 |
| 757 | 234.01 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 19 |
| 760 | 234.02 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 6 |
| 782 | 234.09 | radiation | 20.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 784 | 234.10 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 2 |
| 792 | 234.16 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 817 | 234.33 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 2 |
| 833 | 234.36 | radiation | 1.0 | 10 | > th | dose independent | rect. | 7 | 5 |
| 836 | 234.38 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 864 | 234.49 | wind | 9.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 881 | 234.60 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 884 | 234.60 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 6 |
| 888 | 234.60 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 893 | 234.60 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 894 | 234.60 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 18 |
| 898 | 234.60 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 19 |
| 919 | 234.66 | wind | 5.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 945 | 234.79 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 954 | 234.84 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 997 | 234.98 | wind | 1.0 | 10 | > th | dose independent | rect. | 7 | 18 |
| 1000 | 235.00 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 5 |