Os01g0849500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0849500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.23 | 0.56 | 7.38 | -2.02 | 1.1 | 0.793 | -0.89 | 5.95 | -0.709 | 9.21 | 0.7567 | 4204 | -- | -- |
| 163.37 | 0.6 | 7.26 | -1.02 | 0.909 | -0.338 | -0.063 | -- | -0.522 | 8.62 | 0.7567 | 4204 | -- | -- |
| 143.22 | 0.557 | 7.4 | -2.06 | 1.17 | 0.797 | -- | 5.69 | -0.718 | 9.31 | 0.5604 | 4272 | -- | -- |
| 162.55 | 0.594 | 7.23 | -1.09 | 1.17 | 0.328 | -- | -- | -0.436 | 9.53 | 10.21 | 18105 | -- | -- |
| 189.57 | 0.645 | 7.28 | -1.03 | -- | -0.768 | -- | -0.0838 | -0.517 | -- | 0.5604 | 4272 | -- | -- |
| 165.79 | 0.604 | 7.25 | -1 | 1.23 | -- | 0.132 | -- | -0.514 | 9.52 | -- | -- | -- | -- |
| 165.86 | 0.603 | 7.25 | -0.996 | 1.22 | -- | -- | -- | -0.514 | 9.51 | -- | -- | -- | -- |
| 188.34 | 0.642 | 7.29 | -0.983 | -- | -0.806 | -- | -- | -0.536 | -- | 6.215 | 16774 | -- | -- |
| 188.72 | 0.64 | 7.2 | -- | 1.23 | 0.307 | -- | -- | -0.299 | 9.63 | 14.42 | 19067 | -- | -- |
| 254.19 | 0.745 | 7.28 | -1 | -- | -- | -- | -- | -0.511 | -- | -- | -- | -- | -- |
| 191.99 | 0.648 | 7.22 | -- | 1.23 | -- | -- | -- | -0.403 | 9.57 | -- | -- | -- | -- |
| 213.85 | 0.683 | 7.26 | -- | -- | -0.813 | -- | -- | -0.427 | -- | 6.215 | 16774 | -- | -- |
| 280.8 | 0.782 | 7.26 | -- | -- | -- | -- | -- | -0.399 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.93 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 22 |
| 2 | 143.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 5 |
| 3 | 143.36 | radiation | 1 | 4320 | < th | dose dependent | rect. | 5 | 11 |
| 5 | 143.41 | radiation | 1 | 4320 | < th | dose dependent | rect. | 14 | 6 |
| 6 | 143.41 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 16 |
| 12 | 143.43 | radiation | 1 | 4320 | < th | dose dependent | rect. | 14 | 11 |
| 14 | 143.43 | radiation | 1 | 4320 | < th | dose dependent | rect. | 20 | 20 |
| 19 | 143.45 | radiation | 1 | 4320 | > th | dose independent | rect. | 14 | 5 |
| 51 | 143.58 | radiation | 1 | 4320 | < th | dose dependent | rect. | 12 | 19 |
| 61 | 143.64 | radiation | 1 | 4320 | < th | dose dependent | rect. | 9 | 22 |
| 80 | 143.70 | radiation | 1 | 4320 | > th | dose independent | sin | 16 | NA |
| 102 | 143.80 | radiation | 1 | 4320 | < th | dose dependent | sin | 18 | NA |
| 150 | 143.96 | radiation | 1 | 4320 | < th | dose dependent | rect. | 12 | 22 |
| 184 | 144.10 | radiation | 1 | 4320 | > th | dose independent | rect. | 12 | 19 |
| 187 | 144.10 | radiation | 1 | 4320 | < th | dose dependent | rect. | 5 | 20 |
| 212 | 144.17 | radiation | 1 | 4320 | > th | dose independent | rect. | 9 | 22 |
| 260 | 144.23 | radiation | 1 | 4320 | < th | dose dependent | no | NA | NA |
| 261 | 144.23 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 19 |
| 353 | 144.54 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 23 |
| 361 | 144.58 | radiation | 1 | 4320 | > th | dose independent | rect. | 12 | 22 |
| 366 | 144.62 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 377 | 144.65 | radiation | 1 | 4320 | < th | dose independent | rect. | 5 | 11 |
| 382 | 144.68 | radiation | 1 | 4320 | > th | dose independent | rect. | 5 | 11 |
| 384 | 144.70 | radiation | 1 | 4320 | < th | dose independent | rect. | 14 | 5 |
| 386 | 144.70 | radiation | 1 | 4320 | < th | dose independent | rect. | 14 | 11 |
| 388 | 144.70 | radiation | 1 | 4320 | < th | dose independent | rect. | 14 | 14 |
| 403 | 144.76 | radiation | 1 | 4320 | > th | dose independent | rect. | 5 | 14 |
| 409 | 144.76 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 19 |
| 423 | 144.81 | radiation | 1 | 4320 | < th | dose independent | rect. | 9 | 22 |
| 456 | 144.90 | radiation | 1 | 4320 | > th | dose independent | no | NA | NA |
| 518 | 144.94 | radiation | 1 | 4320 | < th | dose independent | rect. | 24 | 16 |
| 519 | 144.95 | radiation | 1 | 4320 | < th | dose independent | sin | 16 | NA |
| 524 | 144.96 | radiation | 1 | 4320 | < th | dose independent | rect. | 20 | 20 |
| 578 | 145.14 | humidity | 90 | 10 | < th | dose independent | sin | 7 | NA |
| 606 | 145.21 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 22 |
| 633 | 145.26 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 3 |
| 661 | 145.36 | radiation | 1 | 4320 | < th | dose independent | rect. | 5 | 14 |
| 665 | 145.36 | radiation | 1 | 4320 | < th | dose independent | rect. | 5 | 20 |
| 706 | 145.44 | wind | 9 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 737 | 145.51 | radiation | 1 | 4320 | < th | dose independent | rect. | 24 | 19 |
| 743 | 145.52 | radiation | 1 | 4320 | < th | dose independent | no | NA | NA |
| 783 | 145.54 | wind | 7 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 793 | 145.58 | humidity | 90 | 720 | > th | dose independent | rect. | 9 | 18 |
| 873 | 145.87 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 922 | 145.98 | humidity | 90 | 10 | < th | dose independent | rect. | 19 | 14 |
| 927 | 146.02 | humidity | 90 | 720 | < th | dose independent | rect. | 19 | 5 |