BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0849500 Os01g0849500|AK111020
(68 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40960.1 | chr5:16412745-16412951 REVERSE LENGTH=69 79 6e-16
AT3G48660.1 | chr3:18029659-18030133 FORWARD LENGTH=90 70 2e-13
AT5G08391.1 | chr5:2699357-2699566 FORWARD LENGTH=70 70 3e-13
AT5G63500.1 | chr5:25423460-25423669 FORWARD LENGTH=70 68 1e-12
AT3G27027.1 | chr3:9971921-9972130 FORWARD LENGTH=70 65 8e-12
AT3G27030.1 | chr3:9972508-9974225 REVERSE LENGTH=143 64 2e-11
AT5G40980.1 | chr5:16414877-16415086 REVERSE LENGTH=70 61 1e-10
AT3G01950.1 | chr3:324026-324238 FORWARD LENGTH=71 55 7e-09
AT5G14110.1 | chr5:4553964-4554176 REVERSE LENGTH=71 54 1e-08
AT5G40970.1 | chr5:16414081-16414290 FORWARD LENGTH=70 50 3e-07
AT5G50660.1 | chr5:20612575-20612778 FORWARD LENGTH=68 49 4e-07
AT5G50560.1 | chr5:20579233-20579436 FORWARD LENGTH=68 49 4e-07
AT3G01940.1 | chr3:322841-323053 REVERSE LENGTH=71 47 2e-06
>AT5G40960.1 | chr5:16412745-16412951 REVERSE LENGTH=69
Length = 68
Score = 78.6 bits (192), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%)
Query: 1 MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLV 60
M DWA +IASALFA L PG ILQ PG+ PV FMNMKT++ASI VH V+YGL L+LFLV
Sbjct: 1 MHDWAAPLIASALFAFLSPGLILQFPGKESPVGFMNMKTTVASIFVHTVLYGLFLILFLV 60
Query: 61 ILEAHLY 67
+L H+Y
Sbjct: 61 VLNVHVY 67
>AT3G48660.1 | chr3:18029659-18030133 FORWARD LENGTH=90
Length = 89
Score = 70.1 bits (170), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 1 MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLV 60
M DW P ++A LF LL PG + Q+P R R V+F NM+TS ASI+VH +I+ L+ +F +
Sbjct: 1 MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60
Query: 61 ILEAHLY 67
+ H+Y
Sbjct: 61 AIRLHIY 67
>AT5G08391.1 | chr5:2699357-2699566 FORWARD LENGTH=70
Length = 69
Score = 69.7 bits (169), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLV 60
M DW P ++ LF +L PG + Q+PGR + V+F N +TS S++VH+++Y L+ +FL+
Sbjct: 1 MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60
Query: 61 ILEAHLYI 68
L+ H+YI
Sbjct: 61 ALKIHIYI 68
>AT5G63500.1 | chr5:25423460-25423669 FORWARD LENGTH=70
Length = 69
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 1 MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLV 60
M DW P +IA LF +L PG + Q+P R V+F NM+TS ASI+VHA+I+ L+ +F +
Sbjct: 1 MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60
Query: 61 ILEAHLY 67
+ H+Y
Sbjct: 61 AINVHIY 67
>AT3G27027.1 | chr3:9971921-9972130 FORWARD LENGTH=70
Length = 69
Score = 65.1 bits (157), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 2 KDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLVI 61
DW P I+A +LF LL PG + Q+P R R V+F NM TS +I+VHA IY +L + ++
Sbjct: 3 TDWGPVIVAVSLFILLSPGLLFQLPARTRVVEFGNMTTSGIAILVHAFIYFCILTILVIA 62
Query: 62 LEAHLY 67
++ H++
Sbjct: 63 IQIHIH 68
>AT3G27030.1 | chr3:9972508-9974225 REVERSE LENGTH=143
Length = 142
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 1 MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLV 60
M DW P +A LF LL PG ++Q+PGR R V+F +TS S++VH +IY L+ + L+
Sbjct: 1 MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60
Query: 61 ILEAHL 66
L+ H+
Sbjct: 61 ALQIHI 66
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 1 MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLV 60
M DWAP ++ LF +L PG + +PG NR VDF +KT+ +I VH +I+ + + ++
Sbjct: 74 MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILIL 133
Query: 61 ILEAHLY 67
L H+Y
Sbjct: 134 ALNLHIY 140
>AT5G40980.1 | chr5:16414877-16415086 REVERSE LENGTH=70
Length = 69
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 3 DWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIY 51
DW P I+A ALF LL PG + Q+P R R ++F NM TS SI+VHA+IY
Sbjct: 4 DWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVHAIIY 52
>AT3G01950.1 | chr3:324026-324238 FORWARD LENGTH=71
Length = 70
Score = 55.1 bits (131), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%)
Query: 3 DWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLVIL 62
DW P +++ F +L PG + Q+PG+++ V+F +TS SIV+H +++ + + L+ L
Sbjct: 4 DWGPVLMSVIFFIVLSPGVLFQLPGKSKAVEFGGFQTSGPSIVIHTLLFFAFITISLIAL 63
Query: 63 EAHLY 67
H+Y
Sbjct: 64 HIHIY 68
>AT5G14110.1 | chr5:4553964-4554176 REVERSE LENGTH=71
Length = 70
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 43/66 (65%)
Query: 3 DWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLVIL 62
+W P +++ LF +L PG + Q+PG+ + V+F +TS A+IV+H +I+ + + ++ L
Sbjct: 4 NWGPVLMSVFLFIVLTPGVLFQLPGKTKVVEFGGFQTSGAAIVIHTLIFFACITVSIIAL 63
Query: 63 EAHLYI 68
H+Y+
Sbjct: 64 HIHIYV 69
>AT5G40970.1 | chr5:16414081-16414290 FORWARD LENGTH=70
Length = 69
Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 1 MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIY 51
M DWAP ++ LF +L PG + +PG + + F MKT+ +I VH +I+
Sbjct: 1 MADWAPVLVGVVLFVILSPGLLFSLPGHHHTLQFGGMKTNGKAIAVHTLIF 51
>AT5G50660.1 | chr5:20612575-20612778 FORWARD LENGTH=68
Length = 67
Score = 49.3 bits (116), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 1 MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLV 60
M +W P ++A+ LF +L PG + Q+PG N VDF M+TS SI++HA +Y L+ +F V
Sbjct: 1 MTEWLPVVVATVLFVVLSPGLLFQVPGNNNFVDFGKMETSGYSILLHAFLYFGLVTVFTV 60
Query: 61 ILE 63
++
Sbjct: 61 VIH 63
>AT5G50560.1 | chr5:20579233-20579436 FORWARD LENGTH=68
Length = 67
Score = 49.3 bits (116), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 1 MKDWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLV 60
M +W P ++A+ LF +L PG + Q+PG N VDF M+TS SI++HA +Y L+ +F V
Sbjct: 1 MTEWLPVVVATVLFVVLSPGLLFQVPGNNNFVDFGKMETSGYSILLHAFLYFGLVTVFTV 60
Query: 61 ILE 63
++
Sbjct: 61 VIH 63
>AT3G01940.1 | chr3:322841-323053 REVERSE LENGTH=71
Length = 70
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%)
Query: 3 DWAPAIIASALFALLCPGGILQMPGRNRPVDFMNMKTSLASIVVHAVIYGLLLMLFLVIL 62
DW P +A LF +L PG + Q+P R R ++ NM TS SI+VHA+++ ++ + ++ +
Sbjct: 5 DWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIAI 64
Query: 63 EAHLYI 68
+ H++I
Sbjct: 65 QIHIHI 70
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.333 0.145 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,240,358
Number of extensions: 33792
Number of successful extensions: 163
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 163
Number of HSP's successfully gapped: 14
Length of query: 68
Length of database: 11,106,569
Length adjustment: 40
Effective length of query: 28
Effective length of database: 10,009,929
Effective search space: 280278012
Effective search space used: 280278012
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 105 (45.1 bits)