Os01g0847300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF588 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0847300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF588 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.27 | 0.444 | 7.14 | 0.248 | 2.15 | 0.371 | 0.354 | 0.666 | 0.209 | 7.49 | 24.95 | 269 | -- | -- |
| 90.56 | 0.443 | 7.11 | 0.45 | 2.14 | 0.405 | 0.44 | -- | 0.268 | 7.48 | 25 | 269 | -- | -- |
| 89.59 | 0.441 | 7.14 | 0.228 | 2.15 | 0.366 | -- | 0.763 | 0.2 | 7.48 | 25 | 265 | -- | -- |
| 91.32 | 0.445 | 7.12 | 0.451 | 2.14 | 0.408 | -- | -- | 0.273 | 7.48 | 24.9 | 268 | -- | -- |
| 255.9 | 0.745 | 7.15 | 0.671 | -- | 1.47 | -- | 0.19 | 0.523 | -- | 25.77 | 398 | -- | -- |
| 98.71 | 0.466 | 7.16 | 0.322 | 2.36 | -- | 0.627 | -- | 0.0811 | 7.22 | -- | -- | -- | -- |
| 99.76 | 0.468 | 7.16 | 0.335 | 2.36 | -- | -- | -- | 0.0798 | 7.21 | -- | -- | -- | -- |
| 254.33 | 0.743 | 7.08 | 0.768 | -- | 1.49 | -- | -- | 0.695 | -- | 25.69 | 395 | -- | -- |
| 96.66 | 0.458 | 7.13 | -- | 2.18 | 0.354 | -- | -- | 0.225 | 7.47 | 25 | 266 | -- | -- |
| 394.52 | 0.928 | 7.21 | 0.378 | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
| 102.72 | 0.474 | 7.17 | -- | 2.36 | -- | -- | -- | 0.0425 | 7.2 | -- | -- | -- | -- |
| 269.45 | 0.765 | 7.11 | -- | -- | 1.41 | -- | -- | 0.58 | -- | 25.61 | 394 | -- | -- |
| 398.28 | 0.932 | 7.22 | -- | -- | -- | -- | -- | 0.0787 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.43 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 5 | 79.97 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 10 | 80.91 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 20 | 81.29 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 15 |
| 31 | 81.75 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 50 | 82.41 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 57 | 82.72 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 79 | 83.19 | temperature | 25.0 | 270 | < th | dose independent | sin | 6 | NA |
| 101 | 83.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 5 |
| 114 | 83.78 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 141 | 84.23 | temperature | 25.0 | 270 | > th | dose independent | sin | 6 | NA |
| 163 | 84.56 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 18 |
| 170 | 84.61 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 195 | 84.82 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 258 | 85.27 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 8 |
| 265 | 85.33 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 286 | 85.48 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 294 | 85.54 | temperature | 30.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 299 | 85.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 5 |
| 301 | 85.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 306 | 85.63 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 310 | 85.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 311 | 85.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 312 | 85.65 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 313 | 85.65 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 316 | 85.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 317 | 85.65 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 322 | 85.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 323 | 85.65 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 342 | 85.75 | temperature | 20.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 347 | 85.77 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 354 | 85.82 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 359 | 85.85 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 8 |
| 373 | 85.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 19 |
| 374 | 85.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 397 | 86.05 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 18 |
| 435 | 86.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 19 |
| 441 | 86.25 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 19 |
| 453 | 86.32 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 20 |
| 454 | 86.33 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 470 | 86.41 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 15 |
| 477 | 86.44 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 479 | 86.45 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 490 | 86.49 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 507 | 86.55 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 523 | 86.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 525 | 86.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 530 | 86.64 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 9 |
| 537 | 86.65 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 544 | 86.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 3 |
| 557 | 86.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 578 | 86.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 579 | 86.71 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 580 | 86.71 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 583 | 86.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 584 | 86.71 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 590 | 86.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 591 | 86.71 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 599 | 86.73 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 600 | 86.74 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 604 | 86.75 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 18 |
| 613 | 86.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 622 | 86.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 626 | 86.82 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 14 | 7 |
| 627 | 86.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 642 | 86.87 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 681 | 86.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 688 | 86.97 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 14 | 7 |
| 694 | 87.00 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 700 | 87.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 15 |
| 731 | 87.05 | wind | 9.0 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 772 | 87.14 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 15 |
| 775 | 87.15 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 17 |
| 789 | 87.18 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 799 | 87.19 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 803 | 87.20 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 17 |
| 826 | 87.22 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 5 |
| 832 | 87.23 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 834 | 87.24 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 836 | 87.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 21 |
| 840 | 87.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 864 | 87.29 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 870 | 87.30 | temperature | 25.0 | 270 | < th | dose independent | rect. | 16 | 20 |
| 890 | 87.37 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 896 | 87.37 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 9 |
| 903 | 87.37 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 905 | 87.38 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 906 | 87.38 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 907 | 87.38 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 910 | 87.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 911 | 87.38 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 916 | 87.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 1 |
| 917 | 87.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 7 |
| 920 | 87.38 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 921 | 87.38 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 926 | 87.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 927 | 87.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 931 | 87.39 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 23 | 4 |
| 960 | 87.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 975 | 87.44 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 21 |
| 993 | 87.45 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |