Os01g0844200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DVL family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0844200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : DVL family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.37 | 0.291 | 2.64 | 1.71 | 0.0597 | -22.6 | 0.0456 | 140 | -0.0323 | 11 | 994.5 | 799 | -- | -- |
| 42.62 | 0.306 | 2.94 | -0.0937 | 0.0217 | 0.13 | 0.224 | -- | -0.0421 | 6.1 | 1015 | 728 | -- | -- |
| 38.38 | 0.289 | 2.64 | 1.71 | 0.0595 | -22.6 | -- | 140 | -0.0319 | 11.4 | 994.5 | 797 | -- | -- |
| 42.36 | 0.303 | 2.94 | -0.0841 | 0.0272 | -0.352 | -- | -- | -0.0404 | 9.57 | 1015 | 1429 | -- | -- |
| 38.6 | 0.289 | 2.64 | 1.71 | -- | -22.7 | -- | 140 | -0.033 | -- | 994.5 | 799 | -- | -- |
| 42.69 | 0.306 | 2.94 | -0.0942 | 0.0254 | -- | 0.216 | -- | -0.0408 | 6.38 | -- | -- | -- | -- |
| 42.72 | 0.306 | 2.94 | -0.0902 | 0.0438 | -- | -- | -- | -0.0409 | 10 | -- | -- | -- | -- |
| 42.43 | 0.303 | 2.94 | -0.0699 | -- | -0.357 | -- | -- | -0.0338 | -- | 1015 | 1408 | -- | -- |
| 42.47 | 0.304 | 2.94 | -- | 0.0396 | -0.376 | -- | -- | -0.0257 | 9.83 | 1015 | 1407 | -- | -- |
| 42.84 | 0.306 | 2.94 | -0.0908 | -- | -- | -- | -- | -0.0409 | -- | -- | -- | -- | -- |
| 42.94 | 0.307 | 2.94 | -- | 0.0442 | -- | -- | -- | -0.0309 | 10.2 | -- | -- | -- | -- |
| 42.41 | 0.303 | 2.94 | -- | -- | -0.467 | -- | -- | -0.0269 | -- | 1016 | 965 | -- | -- |
| 43.06 | 0.306 | 2.94 | -- | -- | -- | -- | -- | -0.0309 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.68 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 2 | 1 |
| 2 | 34.68 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 3 | 1 |
| 12 | 34.68 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 13 | 34.68 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 23 | 34.71 | temperature | 25 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 33 | 34.79 | temperature | 25 | 10 | > th | dose independent | rect. | 3 | 1 |
| 61 | 37.24 | humidity | 90 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 71 | 37.42 | humidity | 80 | 30 | < th | dose independent | rect. | 1 | 3 |
| 73 | 37.43 | humidity | 80 | 30 | < th | dose independent | rect. | 1 | 1 |
| 104 | 37.94 | temperature | 25 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 144 | 38.37 | atmosphere | 995 | 720 | < th | dose independent | rect. | 16 | 1 |
| 148 | 38.37 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 252 | 38.65 | atmosphere | 995 | 720 | < th | dose dependent | sin | 9 | NA |
| 276 | 38.81 | atmosphere | 995 | 720 | < th | dose independent | sin | 9 | NA |
| 287 | 38.91 | atmosphere | 995 | 720 | > th | dose independent | sin | 9 | NA |
| 341 | 39.33 | atmosphere | 995 | 720 | > th | dose independent | sin | 11 | NA |
| 374 | 39.59 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 446 | 39.82 | atmosphere | 995 | 720 | > th | dose independent | sin | 13 | NA |
| 460 | 39.89 | atmosphere | 995 | 720 | < th | dose dependent | no | NA | NA |
| 656 | 39.92 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 1 | 14 |
| 769 | 40.17 | atmosphere | 995 | 720 | < th | dose independent | no | NA | NA |
| 964 | 40.18 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 1 | 1 |
| 984 | 40.26 | temperature | 20 | 90 | < th | dose independent | rect. | 24 | 3 |
| 986 | 40.26 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 17 | 12 |