Os01g0835700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CCT domain containing protein.
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Os01g0835700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CCT domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.71 | 0.483 | 10.1 | -1.16 | 1.05 | -1.57 | 4.04 | -3.05 | -0.808 | 0.65 | 0.002552 | 154 | 10.7 | -- |
| 115.32 | 0.5 | 10.2 | -1.2 | 0.906 | -1.42 | 1.88 | -- | -0.866 | 0.967 | 0.0611 | 145 | 10.2 | -- |
| 119.64 | 0.509 | 10.2 | -1.38 | 1.06 | -1.37 | -- | 0.956 | -0.834 | 0.929 | 0.04999 | 131 | 8.88 | -- |
| 123.02 | 0.517 | 10.2 | -1.43 | 1.09 | -1.45 | -- | -- | -0.869 | 0.752 | 0.05 | 139 | 9.47 | -- |
| 142.8 | 0.557 | 10.1 | -1.33 | -- | -0.55 | -- | 0.832 | -0.841 | -- | 0.0189 | 115 | 9.24 | -- |
| 151.97 | 0.578 | 10.1 | -1.23 | 0.0702 | -- | -1.92 | -- | -0.793 | 14.3 | -- | -- | -- | -- |
| 156.04 | 0.585 | 10.1 | -1.29 | 0.417 | -- | -- | -- | -0.81 | 8.57 | -- | -- | -- | -- |
| 140.58 | 0.552 | 10.2 | -1.24 | -- | -0.702 | -- | -- | -0.869 | -- | 0.07977 | 153 | 13 | -- |
| 174.97 | 0.616 | 10.1 | -- | 1.1 | -1.41 | -- | -- | -0.823 | 0.709 | 0.2705 | 145 | 9.33 | -- |
| 165.81 | 0.602 | 10.1 | -1.29 | -- | -- | -- | -- | -0.806 | -- | -- | -- | -- | -- |
| 199.75 | 0.661 | 10.1 | -- | 0.413 | -- | -- | -- | -0.667 | 8.8 | -- | -- | -- | -- |
| 187.42 | 0.638 | 10.1 | -- | -- | -0.746 | -- | -- | -0.661 | -- | 0.3888 | 161 | 12.4 | -- |
| 209.45 | 0.676 | 10.1 | -- | -- | -- | -- | -- | -0.664 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 2 | 105.89 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 6 |
| 4 | 106.41 | humidity | 70.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 9 | 107.48 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 13 | 108.49 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 14 | 108.49 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 16 | 108.88 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 20 | 109.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 21 | 109.49 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 22 | 109.52 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 24 | 109.53 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 25 | 109.53 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 27 | 109.53 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 28 | 109.53 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 34 | 109.53 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 35 | 109.53 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 42 | 109.94 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 47 | 110.28 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 57 | 110.94 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 62 | 111.26 | radiation | 1.0 | 270 | < th | dose dependent | sin | 18 | NA |
| 67 | 111.61 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 74 | 111.92 | radiation | 1.0 | 270 | < th | dose independent | sin | 17 | NA |
| 87 | 112.28 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 109 | 112.65 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 119 | 112.99 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 132 | 113.22 | wind | 1.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 138 | 113.29 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 12 | 14 |
| 144 | 113.42 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 145 | 113.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 15 |
| 153 | 113.63 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 155 | 113.66 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 173 | 113.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 178 | 113.93 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 181 | 113.98 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 182 | 113.98 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 185 | 114.01 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 189 | 114.09 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 190 | 114.09 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 198 | 114.23 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 201 | 114.25 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 205 | 114.26 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 208 | 114.26 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 7 |
| 212 | 114.26 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 218 | 114.26 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 219 | 114.26 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 7 |
| 239 | 114.26 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 17 |
| 348 | 115.36 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 369 | 115.41 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 377 | 115.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 17 |
| 378 | 115.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 397 | 115.79 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 16 |
| 399 | 115.79 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 401 | 115.80 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 493 | 116.70 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 18 | 9 |
| 496 | 116.72 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 554 | 116.97 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 3 |
| 559 | 117.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 582 | 117.06 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 587 | 117.08 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 588 | 117.09 | humidity | 70.0 | 270 | > th | dose independent | rect. | 19 | 1 |
| 598 | 117.21 | radiation | 1.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 607 | 117.30 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 710 | 117.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 711 | 117.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 722 | 117.87 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 725 | 117.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 726 | 117.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 730 | 117.91 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 735 | 117.95 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 749 | 117.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 9 |
| 751 | 117.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 793 | 118.27 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 16 |
| 797 | 118.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 9 |
| 798 | 118.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 9 |
| 800 | 118.33 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 22 | 9 |
| 803 | 118.35 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 809 | 118.41 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 823 | 118.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 824 | 118.47 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 825 | 118.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 827 | 118.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 828 | 118.47 | radiation | 40.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 830 | 118.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 15 |
| 840 | 118.50 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 19 | 2 |
| 859 | 118.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 863 | 118.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 15 |
| 867 | 118.66 | radiation | 10.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 882 | 118.75 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 884 | 118.78 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 886 | 118.78 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 934 | 118.96 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 9 |
| 940 | 119.00 | humidity | 70.0 | 10 | > th | dose independent | rect. | 19 | 5 |
| 951 | 119.03 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 16 |
| 987 | 119.17 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 16 |