BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0835700 Os01g0835700|AK109941
(335 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41380.1 | chr5:16562129-16563553 REVERSE LENGTH=308 108 5e-24
AT1G63820.1 | chr1:23682529-23684050 REVERSE LENGTH=294 101 7e-22
AT1G04500.1 | chr1:1221757-1224235 REVERSE LENGTH=387 100 2e-21
AT2G33350.1 | chr2:14134116-14136836 FORWARD LENGTH=411 89 3e-18
AT3G12890.1 | chr3:4099223-4100277 FORWARD LENGTH=252 86 2e-17
AT5G53420.1 | chr5:21673683-21675469 FORWARD LENGTH=265 73 2e-13
AT5G59990.1 | chr5:24151206-24153084 REVERSE LENGTH=242 72 4e-13
AT4G27900.1 | chr4:13890858-13892777 FORWARD LENGTH=262 72 5e-13
AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348 61 9e-10
AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407 60 2e-09
AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356 57 2e-08
AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295 55 6e-08
AT5G61380.1 | chr5:24675540-24678176 FORWARD LENGTH=619 55 7e-08
AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356 53 2e-07
AT2G46790.1 | chr2:19232874-19234901 FORWARD LENGTH=469 53 3e-07
AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374 52 3e-07
AT1G49130.1 | chr1:18174741-18175936 REVERSE LENGTH=327 52 4e-07
AT2G46670.1 | chr2:19164589-19165233 REVERSE LENGTH=184 51 1e-06
AT1G73870.1 | chr1:27779214-27780522 FORWARD LENGTH=393 50 1e-06
AT1G25440.1 | chr1:8933939-8935284 REVERSE LENGTH=418 50 2e-06
AT1G68520.1 | chr1:25709331-25710749 REVERSE LENGTH=407 50 2e-06
AT5G57180.2 | chr5:23168393-23170763 FORWARD LENGTH=436 49 3e-06
AT5G24470.1 | chr5:8356204-8358873 REVERSE LENGTH=668 49 3e-06
AT3G21880.1 | chr3:7706748-7708093 FORWARD LENGTH=365 48 8e-06
AT5G02810.1 | chr5:638283-641461 REVERSE LENGTH=728 47 1e-05
>AT5G41380.1 | chr5:16562129-16563553 REVERSE LENGTH=308
Length = 307
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 67/94 (71%), Gaps = 13/94 (13%)
Query: 141 VRRVFSTGDLQGMNGSSPPRPLPSGESCGQDGSGPFSQ----KVGRYSAEERKERIERYR 196
+RRV+STGDLQ N R ++ + PFS+ KVGRYSAEERKE+I +YR
Sbjct: 173 MRRVYSTGDLQ--NNMEMQR-------SSENSTMPFSEEQNFKVGRYSAEERKEKISKYR 223
Query: 197 VKRHQRNFNKKITYACRKTLADSRPRVKGRFARN 230
KR+QRNF K I YACRKTLADSRPR++GRFARN
Sbjct: 224 AKRNQRNFTKTIKYACRKTLADSRPRIRGRFARN 257
>AT1G63820.1 | chr1:23682529-23684050 REVERSE LENGTH=294
Length = 293
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
Query: 141 VRRVFSTGDLQGMNGS-----SPPRPLPSGESCGQDGSG-PFSQKVGRYSAEERKERIER 194
+RRV+STGDLQ + S PL + S SG S +VGRYS+EERKE+I +
Sbjct: 139 MRRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISK 198
Query: 195 YRVKRHQRNFNKKITYACRKTLADSRPRVKGRFARN 230
YR KR QRNF K I YACRKTLAD+RPRV+GRFARN
Sbjct: 199 YRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARN 234
>AT1G04500.1 | chr1:1221757-1224235 REVERSE LENGTH=387
Length = 386
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 69/103 (66%), Gaps = 12/103 (11%)
Query: 138 PCPVRRVFSTGD--LQGMNG--------SSPPRPLPSGESCGQDGSGPFSQKVGRYSAEE 187
P P++ +F+ GD LQG++G + P P E G D P KVG+ SAE+
Sbjct: 230 PDPIKPIFNPGDHHLQGLDGVENQNHMVAQPVLPQLGTEITGLDD--PSFNKVGKLSAEQ 287
Query: 188 RKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFARN 230
RKE+I RY KR++RNF+KKI YACRKTLADSRPRV+GRFA+N
Sbjct: 288 RKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 330
>AT2G33350.1 | chr2:14134116-14136836 FORWARD LENGTH=411
Length = 410
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 179 KVGRYSAEERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFARN 230
KVG+ S E+RKE+I RY KR++RNFNKKI YACRKTLADSRPRV+GRFA+N
Sbjct: 302 KVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKN 353
>AT3G12890.1 | chr3:4099223-4100277 FORWARD LENGTH=252
Length = 251
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 58/95 (61%), Gaps = 8/95 (8%)
Query: 145 FSTGDLQGMNGSSPP-----RPLPSGESCGQDGSGPFSQ---KVGRYSAEERKERIERYR 196
F GD Q G SP RP +S G G ++ KVGRYS EERK+RI RY
Sbjct: 88 FHGGDHQEYYGFSPEIKPLFRPATGEQSWGNSEGGIQAEPNTKVGRYSVEERKDRIMRYL 147
Query: 197 VKRHQRNFNKKITYACRKTLADSRPRVKGRFARNG 231
K++QRNFNK I Y CRKTLAD R RV+GRFARN
Sbjct: 148 KKKNQRNFNKTIKYVCRKTLADRRVRVRGRFARNN 182
>AT5G53420.1 | chr5:21673683-21675469 FORWARD LENGTH=265
Length = 264
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 14/89 (15%)
Query: 141 VRRVFSTGDLQGMNGSSPPRPLPSGESCGQDGSGPFSQKVGRYSAEERKERIERYRVKRH 200
+RR FS GD+Q + PL + + ++E+R+E++ RY+ K+
Sbjct: 185 MRRAFSEGDIQKLGAGLVQSPL--------------DRIIVSCTSEDRREKLSRYKNKKS 230
Query: 201 QRNFNKKITYACRKTLADSRPRVKGRFAR 229
+RNF +KI YACRK LADS+PRV+GRFA+
Sbjct: 231 RRNFGRKIKYACRKALADSQPRVRGRFAK 259
>AT5G59990.1 | chr5:24151206-24153084 REVERSE LENGTH=242
Length = 241
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 140 PVRRVFSTGDLQGMNGSSPPRPLPSGESCGQDGSGPFSQ---KVGRYSAEERKERIERYR 196
PVRR S GDL PR S S + K +YS EE+KE+IE+YR
Sbjct: 120 PVRRALSAGDL--------PRSSRRESSTVWSESNAIIEGMSKAYKYSPEEKKEKIEKYR 171
Query: 197 VKRHQRNFNKKITYACRKTLADSRPRVKGRFARN 230
KR+ RNFNK+I Y CRKTLADSRPR++GRFARN
Sbjct: 172 SKRNLRNFNKRIKYECRKTLADSRPRIRGRFARN 205
>AT4G27900.1 | chr4:13890858-13892777 FORWARD LENGTH=262
Length = 261
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 19/94 (20%)
Query: 141 VRRVFSTGDLQGMNGSSPPRPLPSGESCGQDGSGPFSQKVGRY----SAEERKERIERYR 196
+RR FS D+Q + G +G ++ R ++E+R+E++ RYR
Sbjct: 178 MRRAFSESDIQTL---------------GTGNTGLVQSQLDRIIISCTSEDRREKLSRYR 222
Query: 197 VKRHQRNFNKKITYACRKTLADSRPRVKGRFARN 230
K+ +RNF +KI YACRK LADS+PR++GRFA+
Sbjct: 223 NKKSKRNFGRKIKYACRKALADSQPRIRGRFAKT 256
>AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348
Length = 347
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 173 SGPFSQKVGRYSAEERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
SGP +Q V + + ER+ R+ RYR K+ R F+K I YA RK A+ RPR+KGRFA+
Sbjct: 263 SGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
>AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407
Length = 406
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 172 GSGPFSQKVGRYSAEERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
G+ P +Q+ ++ ER+ R+ RYR KR R F K I YA RK A+ RPR+KGRFA+
Sbjct: 323 GADPGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAK 380
>AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356
Length = 355
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 184 SAEERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
S+ +R+ R+ RYR KR R F K I YA RK A+SRPR+KGRFA+
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAK 326
>AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295
Length = 294
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (66%)
Query: 182 RYSAEERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
+ S ER+ R+ RYR KR R F K I YA RK A+ RPR+KGRFA+
Sbjct: 223 QLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAK 270
>AT5G61380.1 | chr5:24675540-24678176 FORWARD LENGTH=619
Length = 618
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 174 GPFSQKVGRYSAEERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
P S +V + R+E + ++R KR+QR F+KKI Y RK LA+ RPRVKG+F R
Sbjct: 519 NPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVR 574
>AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356
Length = 355
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 184 SAEERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
S +R+ R+ RYR K+ R F K I YA RK A+ RPR+KGRFA+
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAK 327
>AT2G46790.1 | chr2:19232874-19234901 FORWARD LENGTH=469
Length = 468
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 182 RYSAEERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
R+S +R+ + ++R+KR R F+KK+ Y RK LA+ RPRVKG+F R
Sbjct: 411 RWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 458
>AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374
Length = 373
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 175 PFSQ--KVGRYSAEERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
P SQ V + S +R+ R+ RYR KR R F K I YA RK A+ RPRV GRFA+
Sbjct: 291 PASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAK 347
>AT1G49130.1 | chr1:18174741-18175936 REVERSE LENGTH=327
Length = 326
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 29/43 (67%)
Query: 187 ERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
ER+ R+ RYR KR R F KKI Y RK AD RPR+KGRF R
Sbjct: 277 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVR 319
>AT2G46670.1 | chr2:19164589-19165233 REVERSE LENGTH=184
Length = 183
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 182 RYSAEERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
R+S +R+ + ++R+KR R F+KK+ Y RK LA+ RPRVKG+F R
Sbjct: 126 RWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 173
>AT1G73870.1 | chr1:27779214-27780522 FORWARD LENGTH=393
Length = 392
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 187 ERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
ER+ R+ RY+ KR R F+KKI Y RK A+ RPR+KGRF +
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVK 386
>AT1G25440.1 | chr1:8933939-8935284 REVERSE LENGTH=418
Length = 417
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 188 RKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
R+ R+ RYR KR R F+KKI Y RK A+ RPR+KGRF +
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 402
>AT1G68520.1 | chr1:25709331-25710749 REVERSE LENGTH=407
Length = 406
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 188 RKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
R+ R+ RYR KR R F+KKI Y RK A+ RPR+KGRF +
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 398
>AT5G57180.2 | chr5:23168393-23170763 FORWARD LENGTH=436
Length = 435
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 188 RKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
R+ + RY+ KR R F+KKI Y RK AD RPR+KGRF R
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVR 424
>AT5G24470.1 | chr5:8356204-8358873 REVERSE LENGTH=668
Length = 667
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 166 ESCGQDGSGPFSQKVGRYSAE-ERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVK 224
E +DG +S VG+ +R+ + ++R+KR R + KK+ Y RK LA+ RPR+K
Sbjct: 598 EKKNEDG---YSLSVGKIQQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIK 654
Query: 225 GRFAR 229
G+F R
Sbjct: 655 GQFVR 659
>AT3G21880.1 | chr3:7706748-7708093 FORWARD LENGTH=365
Length = 364
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 186 EERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFARNG 231
+ R E RY+ K+ +R+F K+I YA RK AD+R RVKGRF + G
Sbjct: 305 QARNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAG 350
>AT5G02810.1 | chr5:638283-641461 REVERSE LENGTH=728
Length = 727
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 187 ERKERIERYRVKRHQRNFNKKITYACRKTLADSRPRVKGRFAR 229
+R+ + ++R KR +R F KK+ Y RK LA+ RPRV+G+F R
Sbjct: 668 QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVR 710
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,673,955
Number of extensions: 207971
Number of successful extensions: 601
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 597
Number of HSP's successfully gapped: 27
Length of query: 335
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 236
Effective length of database: 8,392,385
Effective search space: 1980602860
Effective search space used: 1980602860
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)