Os01g0831200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin domain containing protein.
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Os01g0831200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.35 | 0.207 | 13 | -0.31 | 0.0806 | -1.14 | -0.395 | -0.914 | -0.0402 | 23.7 | 9.946 | 243 | -- | -- |
| 19.8 | 0.207 | 12.9 | -0.179 | 0.004 | -1.2 | -0.468 | -- | -0.00168 | 20.7 | 10.7 | 202 | -- | -- |
| 19.88 | 0.208 | 13 | -0.288 | 0.122 | -1.07 | -- | -0.747 | -0.0475 | 1.34 | 13.12 | 263 | -- | -- |
| 20.18 | 0.209 | 13 | -0.169 | 0.104 | -1.1 | -- | -- | -0.0101 | 2.02 | 8.979 | 241 | -- | -- |
| 20.29 | 0.21 | 13 | -0.237 | -- | -1.19 | -- | -0.634 | -0.0185 | -- | 13.76 | 203 | -- | -- |
| 32.67 | 0.268 | 13 | -0.402 | 0.406 | -- | 0.294 | -- | -0.165 | 4.09 | -- | -- | -- | -- |
| 32.88 | 0.269 | 13 | -0.405 | 0.406 | -- | -- | -- | -0.166 | 3.88 | -- | -- | -- | -- |
| 20.4 | 0.21 | 13 | -0.163 | -- | -1.07 | -- | -- | 0.00124 | -- | 17.3 | 182 | -- | -- |
| 20.86 | 0.213 | 12.9 | -- | 0.0878 | -1.18 | -- | -- | 0.0169 | 1.39 | 9.338 | 239 | -- | -- |
| 41.94 | 0.303 | 13 | -0.389 | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
| 37.22 | 0.285 | 13 | -- | 0.398 | -- | -- | -- | -0.121 | 3.89 | -- | -- | -- | -- |
| 21.02 | 0.214 | 12.9 | -- | -- | -1.11 | -- | -- | 0.0263 | -- | 17.2 | 195 | -- | -- |
| 45.92 | 0.316 | 13 | -- | -- | -- | -- | -- | -0.112 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.66 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 32 | 19.40 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 39 | 19.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 47 | 19.61 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 75 | 19.87 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 82 | 19.90 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 88 | 19.93 | temperature | 20 | 720 | > th | dose dependent | sin | 3 | NA |
| 146 | 20.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 161 | 20.25 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |
| 184 | 20.31 | temperature | 30 | 720 | < th | dose dependent | sin | 2 | NA |
| 198 | 20.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 203 | 20.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 8 |
| 210 | 20.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 8 |
| 257 | 20.45 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 259 | 20.45 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 15 |
| 319 | 20.53 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 322 | 20.53 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 339 | 20.55 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 348 | 20.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 359 | 20.58 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 402 | 20.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 423 | 20.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 444 | 20.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 20 |
| 505 | 20.75 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 546 | 20.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 7 |
| 582 | 20.81 | temperature | 20 | 270 | > th | dose dependent | sin | 22 | NA |
| 615 | 20.84 | temperature | 30 | 1440 | < th | dose dependent | sin | 7 | NA |
| 689 | 20.88 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |