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Os01g0830100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0204) R2 : 0.8
β1 : -1.26 (0.0748) R2dD : 0.129 R2D : 0.0834
β2 : 2.09 (0.0533) R2dC : 0.676 R2C : 0.64
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.448 (0.0436) R2dN8 : 0.0621 R2N8 : 0.00657
σ : 0.384
deviance : 67.26
__
_____
C
peak time of C : 5.56
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
55.28 0.349 11.5 -0.817 1.79 -0.972 1.24 3.54 -0.355 5.75 26.51 269 -- --
57.72 0.354 11.5 -1.08 1.83 -0.675 1.06 -- -0.439 5.69 26.16 268 -- --
58.39 0.356 11.5 -0.942 1.79 -0.913 -- 2.23 -0.395 5.67 26.7 294 -- --
59.08 0.358 11.5 -1.14 1.81 -0.702 -- -- -0.429 5.63 26.3 269 -- --
161.43 0.592 11.4 0.0795 -- -2.65 -- 8.76 -0.0578 -- 25.7 386 -- --
64.01 0.375 11.5 -1.26 2.08 -- 1.16 -- -0.443 5.61 -- -- -- --
67.26 0.384 11.5 -1.26 2.09 -- -- -- -0.448 5.56 -- -- -- --
159.24 0.588 11.5 -0.846 -- -2.15 -- -- -0.227 -- 24.64 337 -- --
89.62 0.441 11.4 -- 1.6 -1.42 -- -- -0.118 5.8 15.48 373 -- --
293.9 0.801 11.5 -1.19 -- -- -- -- -0.398 -- -- -- -- --
109.06 0.489 11.5 -- 2.07 -- -- -- -0.308 5.59 -- -- -- --
177.53 0.621 11.5 -- -- -2.28 -- -- -0.103 -- 24.5 340 -- --
331.33 0.85 11.5 -- -- -- -- -- -0.266 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 45.51 temperature 10.0 270 > th dose dependent rect. 24 17
5 46.89 temperature 30.0 270 < th dose independent rect. 17 19
10 47.40 temperature 10.0 270 > th dose dependent rect. 11 7
12 47.42 wind 9.0 270 < th dose independent rect. 24 17
13 47.46 temperature 30.0 270 < th dose independent rect. 18 17
17 47.71 atmosphere 995.0 270 > th dose independent rect. 24 17
18 47.72 temperature 15.0 270 > th dose independent rect. 24 17
19 47.75 radiation 20.0 270 < th dose dependent rect. 16 8
20 47.79 humidity 50.0 270 > th dose independent rect. 17 7
26 47.90 wind 1.0 270 > th dose independent rect. 17 7
30 47.97 precipitation 0.1 270 < th dose independent rect. 17 7
31 47.97 precipitation 0.1 270 < th dose dependent rect. 17 7
34 48.02 precipitation 0.1 270 < th dose independent rect. 17 19
35 48.02 precipitation 0.1 270 < th dose dependent rect. 17 19
39 48.05 atmosphere 1010.0 270 < th dose independent rect. 11 7
40 48.06 temperature 10.0 270 > th dose independent rect. 17 7
41 48.06 radiation 20.0 270 < th dose independent rect. 17 7
45 48.06 atmosphere 1015.0 270 < th dose independent rect. 24 17
46 48.06 radiation 40.0 270 < th dose dependent rect. 17 7
50 48.14 wind 1.0 270 > th dose independent rect. 12 5
51 48.14 wind 9.0 270 < th dose independent rect. 17 7
58 48.23 wind 9.0 270 < th dose independent rect. 12 5
59 48.23 temperature 30.0 270 < th dose independent rect. 17 7
61 48.27 atmosphere 995.0 270 > th dose independent rect. 12 5
62 48.27 wind 9.0 270 < th dose independent rect. 11 7
79 48.42 temperature 20.0 270 > th dose independent rect. 12 5
88 48.48 wind 1.0 270 > th dose independent rect. 11 7
92 48.50 precipitation 0.1 270 < th dose independent rect. 24 17
94 48.50 precipitation 0.1 270 < th dose dependent rect. 24 17
96 48.53 precipitation 0.1 270 < th dose independent rect. 18 17
97 48.53 precipitation 0.1 270 < th dose dependent rect. 18 17
103 48.59 atmosphere 1010.0 270 < th dose independent rect. 12 5
105 48.62 humidity 90.0 270 < th dose independent rect. 12 5
107 48.65 temperature 10.0 270 > th dose independent rect. 12 5
110 48.65 temperature 10.0 270 > th dose independent rect. 17 19
111 48.66 precipitation 0.1 270 < th dose independent rect. 12 5
112 48.66 precipitation 0.1 270 < th dose dependent rect. 12 5
115 48.68 atmosphere 995.0 270 > th dose independent rect. 17 7
119 48.70 wind 1.0 270 > th dose independent rect. 17 19
121 48.73 atmosphere 995.0 270 > th dose independent rect. 11 7
159 48.97 wind 9.0 270 < th dose independent rect. 17 19
165 48.99 temperature 10.0 270 > th dose independent rect. 18 17
172 49.05 humidity 50.0 270 > th dose independent rect. 17 19
175 49.06 wind 9.0 270 < th dose independent rect. 18 17
180 49.11 precipitation 0.1 270 < th dose independent rect. 11 7
181 49.11 atmosphere 995.0 270 > th dose independent rect. 18 17
183 49.11 precipitation 0.1 270 < th dose dependent rect. 11 7
188 49.13 atmosphere 995.0 270 > th dose independent rect. 17 19
207 49.22 humidity 90.0 270 < th dose independent rect. 11 7
211 49.25 humidity 50.0 270 > th dose independent rect. 18 17
250 49.45 temperature 30.0 270 < th dose dependent rect. 7 5
272 49.57 humidity 50.0 270 > th dose dependent rect. 22 10
287 49.64 atmosphere 995.0 270 > th dose dependent rect. 12 5
321 49.77 atmosphere 1015.0 270 < th dose independent rect. 17 7
336 49.83 wind 9.0 270 < th dose independent rect. 13 15
361 49.89 precipitation 0.1 270 < th dose independent rect. 4 9
364 49.89 precipitation 0.1 270 < th dose dependent rect. 4 9
403 50.04 temperature 10.0 270 > th dose independent rect. 4 9
404 50.04 atmosphere 995.0 270 > th dose independent rect. 4 9
405 50.04 atmosphere 1015.0 270 < th dose independent rect. 4 9
406 50.04 temperature 10.0 270 > th dose independent rect. 13 15
410 50.06 humidity 50.0 10 > th dose dependent rect. 1 9
414 50.08 humidity 70.0 10 > th dose independent rect. 19 6
480 50.26 radiation 1.0 270 > th dose independent rect. 12 5
492 50.27 temperature 30.0 270 < th dose dependent rect. 7 16
547 50.42 humidity 90.0 90 < th dose independent rect. 20 17
548 50.43 radiation 40.0 270 < th dose independent rect. 18 17
551 50.43 radiation 1.0 1440 < th dose dependent rect. 20 6
553 50.44 radiation 1.0 1440 > th dose independent rect. 11 2
555 50.44 atmosphere 995.0 270 > th dose independent rect. 13 16
562 50.46 wind 9.0 270 < th dose independent rect. 4 9
576 50.49 temperature 30.0 10 < th dose independent rect. 20 17
577 50.49 humidity 90.0 10 < th dose independent rect. 20 18
586 50.50 wind 1.0 270 > th dose dependent rect. 12 5
607 50.55 temperature 10.0 1440 > th dose independent rect. 20 6
610 50.55 temperature 30.0 1440 < th dose independent rect. 20 6
614 50.55 humidity 50.0 1440 > th dose independent rect. 20 6
620 50.55 atmosphere 995.0 1440 > th dose independent rect. 20 6
621 50.55 radiation 1.0 1440 < th dose independent rect. 20 6
641 50.55 temperature 10.0 1440 > th dose independent rect. 2 18
656 50.59 temperature 30.0 270 < th dose independent rect. 6 6
667 50.61 wind 9.0 270 < th dose independent rect. 22 21
672 50.63 radiation 1.0 270 < th dose independent rect. 8 16
675 50.63 radiation 10.0 270 < th dose dependent rect. 8 16
690 50.69 radiation 1.0 90 > th dose independent rect. 5 9
737 50.74 humidity 70.0 270 > th dose independent rect. 23 9
739 50.74 wind 9.0 270 < th dose dependent rect. 17 6
756 50.76 radiation 10.0 270 < th dose dependent sin 16 NA
765 50.78 radiation 40.0 270 < th dose dependent rect. 8 16
798 50.85 humidity 90.0 270 < th dose independent rect. 18 6
831 50.94 radiation 1.0 270 < th dose independent sin 17 NA
851 50.97 humidity 50.0 270 > th dose independent rect. 24 17
856 50.98 precipitation 0.1 270 < th dose independent rect. 7 16
859 50.98 precipitation 0.1 270 < th dose dependent rect. 7 16
877 51.00 radiation 20.0 270 < th dose independent rect. 23 8
918 51.06 temperature 15.0 270 > th dose independent rect. 23 8
920 51.06 radiation 40.0 270 < th dose dependent sin 15 NA
926 51.07 temperature 30.0 270 < th dose independent rect. 23 8
927 51.07 humidity 50.0 270 > th dose independent rect. 23 8
929 51.07 atmosphere 995.0 270 > th dose independent rect. 23 8
931 51.07 temperature 10.0 270 > th dose independent rect. 7 16
935 51.08 atmosphere 1015.0 270 < th dose independent rect. 18 18
940 51.09 wind 9.0 270 < th dose independent rect. 23 8
953 51.12 radiation 40.0 270 < th dose dependent rect. 23 8
999 51.17 radiation 20.0 10 < th dose dependent rect. 1 16