Os01g0827200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phox-like domain containing protein.
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Os01g0827200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phox-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.87 | 0.297 | 9.57 | -0.3 | 2 | -0.709 | 0.318 | -0.322 | -0.222 | 6.52 | 30.56 | 27 | -- | -- |
| 40.3 | 0.296 | 9.57 | -0.292 | 2 | -0.702 | 0.403 | -- | -0.221 | 6.55 | 30.43 | 26 | -- | -- |
| 40.11 | 0.295 | 9.57 | -0.299 | 2 | -0.708 | -- | -0.371 | -0.223 | 6.53 | 30.91 | 26 | -- | -- |
| 40.7 | 0.297 | 9.57 | -0.286 | 2 | -0.716 | -- | -- | -0.224 | 6.52 | 30.64 | 26 | -- | -- |
| 228.96 | 0.705 | 9.61 | -0.214 | -- | -0.816 | -- | -0.193 | -0.169 | -- | 7.231 | 2 | -- | -- |
| 48.81 | 0.328 | 9.55 | -0.271 | 2.14 | -- | 0.506 | -- | -0.182 | 7.65 | -- | -- | -- | -- |
| 49.53 | 0.33 | 9.55 | -0.259 | 2.14 | -- | -- | -- | -0.183 | 7.64 | -- | -- | -- | -- |
| 229.19 | 0.705 | 9.61 | -0.211 | -- | -0.817 | -- | -- | -0.169 | -- | 7.303 | 2 | -- | -- |
| 42.78 | 0.305 | 9.56 | -- | 1.99 | -0.697 | -- | -- | -0.183 | 6.51 | 28.53 | 21 | -- | -- |
| 295.53 | 0.803 | 9.6 | -0.23 | -- | -- | -- | -- | -0.151 | -- | -- | -- | -- | -- |
| 51.3 | 0.335 | 9.54 | -- | 2.14 | -- | -- | -- | -0.154 | 7.64 | -- | -- | -- | -- |
| 230.36 | 0.707 | 9.6 | -- | -- | -0.819 | -- | -- | -0.145 | -- | 7.474 | 2 | -- | -- |
| 296.92 | 0.804 | 9.6 | -- | -- | -- | -- | -- | -0.125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.45 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 4 | 33.33 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 6 | 14 |
| 13 | 33.89 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 19 |
| 17 | 34.18 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 19 |
| 31 | 34.60 | radiation | 1.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 32 | 34.62 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 14 |
| 34 | 34.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 35 | 34.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 41 | 34.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 6 |
| 42 | 34.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 6 |
| 43 | 34.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 16 |
| 44 | 34.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 45 | 34.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 46 | 34.77 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 47 | 34.77 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 49 | 34.79 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 53 | 34.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 54 | 34.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 55 | 34.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 58 | 34.87 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 67 | 34.95 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 20 |
| 69 | 34.97 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 10 |
| 70 | 34.99 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 75 | 35.02 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 76 | 35.03 | radiation | 1.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 78 | 35.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 79 | 35.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 82 | 35.07 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 83 | 35.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 85 | 35.09 | radiation | 30.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 86 | 35.09 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 20 | 9 |
| 87 | 35.11 | radiation | 20.0 | 10 | < th | dose dependent | sin | 20 | NA |
| 96 | 35.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 110 | 35.27 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 111 | 35.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 6 |
| 114 | 35.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 115 | 35.29 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 9 |
| 117 | 35.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 118 | 35.29 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 9 |
| 123 | 35.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 15 |
| 124 | 35.29 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 15 |
| 132 | 35.31 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 9 |
| 135 | 35.34 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 141 | 35.37 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 148 | 35.41 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 6 |
| 150 | 35.42 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 162 | 35.46 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 18 |
| 163 | 35.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 18 |
| 169 | 35.50 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 176 | 35.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 178 | 35.55 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 181 | 35.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 183 | 35.56 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 185 | 35.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 6 |
| 190 | 35.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 6 |
| 194 | 35.59 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 197 | 35.61 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 15 |
| 226 | 35.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 18 |
| 233 | 35.68 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 18 |
| 239 | 35.70 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 6 |
| 247 | 35.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 18 |
| 248 | 35.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 18 |
| 251 | 35.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 264 | 35.80 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 267 | 35.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 3 |
| 268 | 35.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 272 | 35.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 273 | 35.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 21 |
| 281 | 35.86 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 5 |
| 283 | 35.87 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 305 | 35.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 15 |
| 306 | 35.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 15 |
| 325 | 36.01 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 328 | 36.01 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 352 | 36.06 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 355 | 36.06 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 376 | 36.11 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 402 | 36.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 21 |
| 405 | 36.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 21 |
| 412 | 36.19 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 432 | 36.23 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 434 | 36.23 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 14 | 6 |
| 457 | 36.28 | radiation | 1.0 | 270 | < th | dose independent | sin | 13 | NA |
| 477 | 36.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 9 |
| 481 | 36.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 9 |
| 538 | 36.48 | radiation | 1.0 | 270 | > th | dose independent | sin | 13 | NA |
| 576 | 36.55 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 6 |
| 586 | 36.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 18 |
| 616 | 36.64 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 627 | 36.66 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 10 | 6 |
| 640 | 36.70 | radiation | 10.0 | 30 | > th | dose independent | sin | 21 | NA |
| 649 | 36.73 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 686 | 36.80 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 694 | 36.82 | radiation | 1.0 | 10 | > th | dose independent | rect. | 10 | 6 |
| 706 | 36.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 3 |
| 707 | 36.85 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 5 |
| 731 | 36.89 | temperature | 15.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 748 | 36.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 749 | 36.92 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 751 | 36.92 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 752 | 36.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 753 | 36.92 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 754 | 36.92 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 755 | 36.92 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 782 | 36.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 16 |
| 807 | 37.01 | humidity | 50.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 830 | 37.03 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 16 | 18 |
| 871 | 37.08 | wind | 9.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 877 | 37.09 | radiation | 10.0 | 30 | < th | dose independent | sin | 21 | NA |
| 890 | 37.10 | humidity | 50.0 | 10 | > th | dose independent | rect. | 17 | 17 |
| 896 | 37.11 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 907 | 37.14 | wind | 9.0 | 270 | < th | dose dependent | rect. | 14 | 5 |
| 941 | 37.21 | temperature | 10.0 | 10 | > th | dose independent | rect. | 10 | 6 |
| 943 | 37.21 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 10 | 6 |
| 944 | 37.21 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 10 | 6 |
| 951 | 37.21 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 10 | 6 |