Os01g0824900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0824900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 445.3 | 0.991 | 4.1 | -2.82 | 1.24 | 3.16 | -1.74 | -2.73 | -1.48 | 10.8 | 26.7 | 925 | 8.93 | -- |
| 446.99 | 0.985 | 4.03 | -2.33 | 1.2 | 3.03 | -1.44 | -- | -1.3 | 10.8 | 26.67 | 893 | 8.2 | -- |
| 455.06 | 0.994 | 4.06 | -2.73 | 1.22 | 3.24 | -- | -2.04 | -1.32 | 10.5 | 26.9 | 884 | 8.36 | -- |
| 456.07 | 0.995 | 4.03 | -2.4 | 1.26 | 3.07 | -- | -- | -1.31 | 10.6 | 26.68 | 870 | 8.42 | -- |
| 501.87 | 1.04 | 4.07 | -2.65 | -- | 2.55 | -- | -1.28 | -1.26 | -- | 27.31 | 1179 | 7.6 | -- |
| 626.42 | 1.17 | 3.98 | -1.83 | 0.898 | -- | -0.821 | -- | -1.04 | 7.85 | -- | -- | -- | -- |
| 627.57 | 1.17 | 3.98 | -1.86 | 0.916 | -- | -- | -- | -1.04 | 7.36 | -- | -- | -- | -- |
| 503.13 | 1.04 | 4.05 | -2.42 | -- | 2.45 | -- | -- | -1.19 | -- | 27.3 | 1181 | 7.68 | -- |
| 600.31 | 1.14 | 3.95 | -- | 1.16 | 2.56 | -- | -- | -0.939 | 10.1 | 26.6 | 813 | 7.56 | -- |
| 672.17 | 1.21 | 4 | -1.84 | -- | -- | -- | -- | -1.03 | -- | -- | -- | -- | -- |
| 718.44 | 1.25 | 3.93 | -- | 0.899 | -- | -- | -- | -0.837 | 7.5 | -- | -- | -- | -- |
| 646.5 | 1.18 | 3.98 | -- | -- | 2.22 | -- | -- | -0.929 | -- | 26.71 | 1105 | 6.97 | -- |
| 761.64 | 1.29 | 3.96 | -- | -- | -- | -- | -- | -0.824 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 432.73 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 4 | 434.98 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 9 |
| 55 | 471.78 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 6 |
| 69 | 473.44 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 73 | 473.92 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 167 | 481.48 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 169 | 481.59 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 171 | 481.61 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 8 |
| 172 | 481.62 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 191 | 484.40 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 270 | 489.43 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 282 | 490.19 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 7 |
| 311 | 491.76 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 415 | 494.97 | humidity | 70 | 4320 | < th | dose dependent | rect. | 19 | 2 |
| 438 | 495.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 481 | 496.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 519 | 497.35 | temperature | 25 | 720 | > th | dose independent | sin | 15 | NA |
| 565 | 498.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 570 | 498.47 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 582 | 499.33 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 617 | 500.38 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 641 | 500.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 646 | 500.92 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 16 |
| 684 | 501.62 | temperature | 30 | 1440 | < th | dose independent | sin | 13 | NA |
| 689 | 501.78 | humidity | 70 | 1440 | < th | dose independent | sin | 13 | NA |
| 695 | 501.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 823 | 503.82 | temperature | 25 | 720 | < th | dose independent | sin | 17 | NA |
| 840 | 504.04 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 22 |
| 917 | 504.38 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 949 | 504.66 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 15 |