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Os01g0824800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0285) R2 : 0.808
β1 : 3.26 (0.128) R2dD : 0.419 R2D : 0.477
β2 : 0.752 (0.067) R2dC : 0.0548 R2C : 0.035
β3 : -1.48 (0.16) R2dE : 0.0561 R2E : 0.252
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.01 (0.066) R2dN8 : 0.164 R2N8 : 0.0899
σ : 0.518
deviance : 123.49
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C
peak time of C : 1.88
E
wheather : temperature
threshold : 20.94
memory length : 4722
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
119.87 0.514 7.36 -3.14 0.819 -213 -0.451 -442 1.13 1.81 15 4473 -- --
139.95 0.555 10.4 3.77 0.808 -1.92 -0.353 -- 1.25 1.86 15 4473 -- --
120.58 0.511 7.36 -3.13 0.815 -213 -- -442 1.13 1.65 15 4456 -- --
123.49 0.518 10.4 3.26 0.752 -1.48 -- -- 1.01 1.88 20.94 4722 -- --
160.41 0.59 7.36 -3.08 -- -213 -- -442 1.14 -- 15 4323 -- --
146.88 0.568 10.4 3.85 0.777 -- -0.124 -- 1.27 1.84 -- -- -- --
146.93 0.568 10.4 3.86 0.776 -- -- -- 1.27 1.79 -- -- -- --
156.19 0.582 10.4 3.14 -- -1.48 -- -- 1 -- 21.2 3988 -- --
193.52 0.648 10.7 -- 0.722 -2.99 -- -- -0.0488 1.87 45.92 47520 -- --
183.51 0.633 10.4 3.89 -- -- -- -- 1.29 -- -- -- -- --
538.87 1.09 10.5 -- 0.848 -- -- -- 0.845 1.92 -- -- -- --
224.97 0.699 10.7 -- -- -3.04 -- -- -0.0497 -- 46 47520 -- --
582.26 1.13 10.4 -- -- -- -- -- 0.86 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 106.87 wind 1 43200 > th dose independent rect. 16 11
2 107.09 wind 1 43200 < th dose independent rect. 15 12
7 107.65 wind 1 43200 > th dose independent sin 15 NA
9 108.25 wind 1 43200 < th dose independent sin 15 NA
10 108.89 wind 1 43200 < th dose dependent rect. 12 15
22 109.97 wind 1 43200 < th dose dependent rect. 8 19
23 110.10 wind 1 43200 < th dose dependent sin 17 NA
49 111.74 wind 1 14400 < th dose dependent rect. 16 12
95 113.02 wind 3 43200 < th dose dependent rect. 17 6
100 113.10 humidity 70 43200 > th dose dependent rect. 19 3
121 113.52 wind 1 14400 < th dose independent rect. 21 7
124 113.55 wind 1 43200 > th dose independent rect. 22 4
125 113.56 wind 1 14400 < th dose dependent sin 14 NA
126 113.56 wind 1 4320 < th dose dependent rect. 3 6
127 113.56 wind 1 14400 < th dose dependent rect. 21 7
132 113.63 wind 1 43200 < th dose independent rect. 8 20
150 114.02 humidity 70 43200 > th dose dependent rect. 4 5
163 114.20 wind 1 14400 > th dose independent rect. 21 7
165 114.21 wind 1 14400 < th dose independent rect. 22 4
168 114.25 wind 1 14400 < th dose independent rect. 18 10
172 114.33 wind 1 43200 > th dose independent rect. 8 20
181 114.41 wind 3 14400 < th dose independent rect. 8 2
187 114.48 wind 9 14400 > th dose independent rect. 16 4
203 114.67 humidity 80 43200 > th dose independent rect. 4 7
219 114.82 wind 1 14400 < th dose independent rect. 24 1
222 114.84 wind 1 4320 > th dose independent rect. 3 6
223 114.84 wind 5 14400 < th dose dependent rect. 8 2
237 114.96 humidity 80 43200 < th dose independent rect. 2 9
240 114.97 wind 1 43200 > th dose independent rect. 17 20
245 115.01 wind 3 14400 > th dose independent rect. 8 2
250 115.04 wind 7 43200 > th dose independent rect. 18 2
256 115.07 wind 1 4320 < th dose independent rect. 3 6
293 115.36 humidity 80 43200 < th dose independent rect. 17 20
306 115.44 wind 3 14400 > th dose independent rect. 5 9
322 115.52 wind 1 14400 > th dose independent rect. 24 1
324 115.54 wind 3 14400 > th dose independent rect. 6 7
341 115.59 wind 1 14400 < th dose dependent rect. 17 23
349 115.63 wind 3 14400 < th dose independent rect. 5 9
368 115.70 wind 1 14400 < th dose dependent rect. 13 23
369 115.70 wind 1 14400 < th dose dependent rect. 19 23
373 115.73 wind 3 14400 < th dose independent rect. 6 7
375 115.73 humidity 80 43200 > th dose independent rect. 17 19
377 115.73 wind 5 14400 < th dose dependent rect. 7 5
382 115.76 humidity 60 43200 > th dose dependent rect. 1 22
383 115.77 wind 7 14400 < th dose independent rect. 18 2
389 115.78 humidity 60 43200 > th dose dependent rect. 16 22
404 115.82 wind 1 14400 < th dose dependent no NA NA
432 115.89 wind 1 14400 < th dose dependent rect. 21 23
435 115.90 wind 1 14400 > th dose dependent rect. 8 2
437 115.91 wind 9 43200 < th dose independent rect. 16 2
442 115.92 wind 1 14400 < th dose dependent rect. 19 21
464 115.99 wind 9 14400 < th dose dependent rect. 5 9
497 116.02 wind 1 14400 < th dose dependent rect. 2 23
513 116.05 wind 9 43200 > th dose independent rect. 16 2
521 116.06 humidity 60 43200 > th dose dependent sin 4 NA
531 116.08 wind 7 14400 > th dose dependent rect. 17 3
543 116.09 humidity 60 43200 > th dose dependent rect. 12 23
545 116.10 wind 1 14400 > th dose dependent rect. 5 9
561 116.13 wind 5 14400 > th dose dependent rect. 19 1
579 116.16 humidity 60 43200 > th dose dependent no NA NA
588 116.18 wind 9 14400 > th dose independent rect. 16 9
589 116.18 wind 7 43200 > th dose independent rect. 16 13
596 116.19 wind 9 14400 < th dose independent rect. 16 4
602 116.19 wind 1 14400 < th dose dependent rect. 24 23
634 116.24 wind 7 43200 < th dose independent rect. 16 13
679 116.32 humidity 90 14400 < th dose independent rect. 4 1
717 116.37 humidity 80 43200 > th dose independent rect. 18 6
781 116.48 humidity 70 43200 > th dose independent rect. 11 16
817 116.54 humidity 80 43200 > th dose independent rect. 17 8
818 116.54 humidity 70 43200 < th dose independent rect. 11 17
823 116.55 humidity 70 43200 < th dose independent rect. 12 15
830 116.55 wind 7 43200 > th dose dependent rect. 16 13
847 116.58 humidity 80 43200 < th dose independent rect. 18 6
860 116.60 wind 5 14400 > th dose dependent rect. 17 7
888 116.64 humidity 70 43200 > th dose independent rect. 12 12
904 116.66 humidity 80 43200 < th dose independent rect. 17 13
911 116.67 wind 3 14400 > th dose independent sin 1 NA
912 116.67 wind 7 43200 < th dose independent rect. 17 7
941 116.70 humidity 60 43200 > th dose dependent sin 16 NA
945 116.71 wind 9 14400 < th dose dependent sin 2 NA
964 116.74 wind 1 43200 > th dose independent rect. 3 22
975 116.77 wind 3 14400 < th dose independent sin 1 NA