Os01g0823400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0823400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.47 | 0.606 | 2.96 | -0.226 | 0.0299 | 0.873 | -0.266 | -0.58 | 0.115 | 14 | 50.01 | 6247 | -- | -- |
| 166.71 | 0.601 | 2.95 | -0.218 | 0.0299 | 0.673 | -0.269 | -- | 0.111 | 13.9 | 50.26 | 5991 | -- | -- |
| 166.71 | 0.601 | 2.96 | -0.237 | 0.038 | 0.904 | -- | -0.642 | 0.114 | 16.3 | 50 | 6214 | -- | -- |
| 166.7 | 0.601 | 2.94 | -0.217 | 0.0358 | 0.672 | -- | -- | 0.117 | 13.8 | 51 | 6969 | -- | -- |
| 166.79 | 0.601 | 2.96 | -0.24 | -- | 0.903 | -- | -0.639 | 0.113 | -- | 50 | 6211 | -- | -- |
| 173.21 | 0.617 | 2.95 | -0.00853 | 0.0279 | -- | -0.346 | -- | 0.0773 | 13.5 | -- | -- | -- | -- |
| 173.65 | 0.617 | 2.95 | -0.0195 | 0.0406 | -- | -- | -- | 0.0758 | 16.4 | -- | -- | -- | -- |
| 166.75 | 0.601 | 2.95 | -0.227 | -- | 0.681 | -- | -- | 0.103 | -- | 51.01 | 6961 | -- | -- |
| 167.8 | 0.603 | 2.95 | -- | 0.0564 | 0.602 | -- | -- | 0.134 | 16.8 | 51.53 | 6953 | -- | -- |
| 173.74 | 0.616 | 2.95 | -0.0211 | -- | -- | -- | -- | 0.0747 | -- | -- | -- | -- | -- |
| 173.66 | 0.616 | 2.95 | -- | 0.041 | -- | -- | -- | 0.078 | 16.4 | -- | -- | -- | -- |
| 167.79 | 0.603 | 2.95 | -- | -- | 0.567 | -- | -- | 0.11 | -- | 51.74 | 7417 | -- | -- |
| 173.75 | 0.615 | 2.95 | -- | -- | -- | -- | -- | 0.0771 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.21 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 1 |
| 4 | 161.21 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 10 | 161.72 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 12 | 3 |
| 14 | 162.12 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 16 | 162.16 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 20 | 162.38 | radiation | 10.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 40 | 162.65 | wind | 3.0 | 90 | > th | dose dependent | rect. | 8 | 2 |
| 54 | 163.12 | wind | 5.0 | 90 | > th | dose independent | rect. | 9 | 1 |
| 59 | 163.50 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 9 | 5 |
| 72 | 163.77 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 75 | 163.95 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 96 | 164.18 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 2 |
| 181 | 165.16 | temperature | 25.0 | 90 | < th | dose independent | rect. | 13 | 2 |
| 202 | 165.39 | temperature | 25.0 | 10 | < th | dose independent | rect. | 12 | 4 |
| 222 | 165.70 | humidity | 60.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 259 | 165.85 | humidity | 60.0 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 276 | 165.90 | wind | 1.0 | 90 | < th | dose dependent | rect. | 6 | 16 |
| 284 | 165.97 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 301 | 166.07 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 323 | 166.14 | wind | 1.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 330 | 166.19 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 334 | 166.20 | wind | 1.0 | 90 | < th | dose dependent | rect. | 6 | 6 |
| 345 | 166.27 | wind | 1.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 417 | 166.59 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 439 | 166.61 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 12 | 3 |
| 447 | 166.64 | wind | 1.0 | 90 | < th | dose dependent | rect. | 6 | 2 |
| 489 | 166.82 | humidity | 80.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 500 | 166.86 | wind | 9.0 | 90 | > th | dose dependent | rect. | 13 | 3 |
| 507 | 166.91 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 509 | 166.91 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 510 | 166.91 | wind | 9.0 | 90 | > th | dose independent | rect. | 13 | 3 |
| 528 | 166.95 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 6 |
| 555 | 167.03 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 561 | 167.04 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 584 | 167.07 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 13 | 4 |
| 630 | 167.14 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 646 | 167.16 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 21 | 10 |
| 658 | 167.17 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 665 | 167.17 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 674 | 167.18 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 744 | 167.19 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 12 | 14 |
| 764 | 167.19 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 21 | 21 |
| 769 | 167.20 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 773 | 167.20 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 776 | 167.20 | atmosphere | 1010.0 | 14400 | > th | dose dependent | no | NA | NA |
| 819 | 167.20 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 5 | 19 |
| 881 | 167.21 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 947 | 167.22 | wind | 7.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 955 | 167.22 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 988 | 167.23 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 4 | NA |