Os01g0820800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0820800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.36 | 0.333 | 9.41 | -0.251 | 0.476 | -0.869 | -0.693 | -1.15 | 0.117 | 11.7 | 21.1 | 5551 | -- | -- |
| 50.47 | 0.331 | 9.47 | -0.201 | 0.459 | -0.545 | -0.641 | -- | 0.101 | 11.7 | 22.5 | 2230 | -- | -- |
| 52.41 | 0.337 | 9.42 | -0.265 | 0.475 | -0.87 | -- | -1.16 | 0.114 | 11.8 | 21.05 | 5435 | -- | -- |
| 52.35 | 0.337 | 9.46 | -0.261 | 0.506 | -0.547 | -- | -- | 0.089 | 11.7 | 22.4 | 2280 | -- | -- |
| 66.44 | 0.38 | 9.43 | -0.288 | -- | -0.829 | -- | -1.1 | 0.113 | -- | 21.05 | 5807 | -- | -- |
| 61.74 | 0.368 | 9.41 | -0.0146 | 0.451 | -- | -0.728 | -- | 0.289 | 11.5 | -- | -- | -- | -- |
| 64.01 | 0.375 | 9.42 | -0.0434 | 0.454 | -- | -- | -- | 0.286 | 11.7 | -- | -- | -- | -- |
| 67.48 | 0.383 | 9.47 | -0.326 | -- | -0.543 | -- | -- | 0.0878 | -- | 22 | 3086 | -- | -- |
| 54.01 | 0.342 | 9.45 | -- | 0.506 | -0.492 | -- | -- | 0.132 | 11.7 | 22.47 | 2263 | -- | -- |
| 77 | 0.41 | 9.43 | -0.0565 | -- | -- | -- | -- | 0.281 | -- | -- | -- | -- | -- |
| 64.06 | 0.374 | 9.41 | -- | 0.455 | -- | -- | -- | 0.291 | 11.7 | -- | -- | -- | -- |
| 68.72 | 0.386 | 9.45 | -- | -- | -0.436 | -- | -- | 0.149 | -- | 22.48 | 1752 | -- | -- |
| 77.08 | 0.41 | 9.42 | -- | -- | -- | -- | -- | 0.287 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.05 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 49.09 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 161 | 50.05 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 165 | 50.06 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 167 | 50.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 169 | 50.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 172 | 50.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 205 | 50.20 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 235 | 50.31 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 257 | 50.37 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 12 | NA |
| 355 | 50.56 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 357 | 50.56 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 397 | 50.64 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 407 | 50.66 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 452 | 50.75 | temperature | 15.0 | 4320 | > th | dose dependent | sin | 10 | NA |
| 469 | 50.77 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 7 |
| 477 | 50.78 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 485 | 50.79 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 486 | 50.79 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 494 | 50.80 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 506 | 50.81 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 7 |
| 508 | 50.81 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 11 |
| 523 | 50.82 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 530 | 50.83 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 601 | 50.90 | temperature | 20.0 | 4320 | < th | dose independent | sin | 14 | NA |
| 604 | 50.90 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 13 |
| 636 | 50.92 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 18 |
| 654 | 50.94 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 678 | 50.96 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 694 | 50.97 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 807 | 51.04 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 867 | 51.07 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 868 | 51.07 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 873 | 51.07 | atmosphere | 1010.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 891 | 51.08 | temperature | 20.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 893 | 51.08 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 1 | 3 |
| 899 | 51.08 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 902 | 51.08 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |