Os01g0818300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : KH domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0818300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : KH domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.02 | 0.556 | 8.14 | 2.49 | 2.51 | 0.865 | 1.24 | -1.21 | 0.592 | 18 | 80 | 1386 | -- | -- |
| 141.39 | 0.554 | 8.14 | 2.44 | 2.52 | 0.826 | 1.16 | -- | 0.587 | 18 | 81 | 1385 | -- | -- |
| 143.76 | 0.558 | 8.14 | 2.47 | 2.52 | 0.886 | -- | -1.12 | 0.598 | 18 | 80.14 | 1400 | -- | -- |
| 144.8 | 0.56 | 8.14 | 2.38 | 2.51 | 0.821 | -- | -- | 0.578 | 18 | 80.78 | 1387 | -- | -- |
| 440.18 | 0.982 | 8.11 | 2.28 | -- | -0.653 | -- | -0.314 | 0.474 | -- | 80.14 | 1400 | -- | -- |
| 149.36 | 0.573 | 8.16 | 2.37 | 2.54 | -- | 1.27 | -- | 0.521 | 18 | -- | -- | -- | -- |
| 153.32 | 0.58 | 8.15 | 2.36 | 2.55 | -- | -- | -- | 0.526 | 18 | -- | -- | -- | -- |
| 434.45 | 0.975 | 8.11 | 2.27 | -- | -0.697 | -- | -- | 0.457 | -- | 80 | 4881 | -- | -- |
| 277.84 | 0.776 | 8.13 | -- | 2.56 | 1.15 | -- | -- | 0.667 | 18 | 87.89 | 3021 | -- | -- |
| 489.5 | 1.03 | 8.11 | 2.29 | -- | -- | -- | -- | 0.468 | -- | -- | -- | -- | -- |
| 300.49 | 0.811 | 8.21 | -- | 2.51 | -- | -- | -- | 0.263 | 18 | -- | -- | -- | -- |
| 568.92 | 1.11 | 8.16 | -- | -- | -0.728 | -- | -- | 0.24 | -- | 77.08 | 4940 | -- | -- |
| 627.61 | 1.17 | 8.17 | -- | -- | -- | -- | -- | 0.214 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.71 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 3 | 133.17 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 5 | 133.76 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 12 | 134.34 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 15 |
| 17 | 134.64 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 14 | 11 |
| 24 | 134.86 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 3 |
| 34 | 135.30 | humidity | 90.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 43 | 135.46 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 48 | 135.54 | humidity | 90.0 | 720 | > th | dose independent | rect. | 21 | 3 |
| 54 | 135.69 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 65 | 136.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 8 |
| 66 | 136.17 | humidity | 90.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 71 | 136.37 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 72 | 136.37 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 76 | 136.47 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 80 | 136.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 82 | 136.60 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 83 | 136.72 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 84 | 136.77 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 21 | 7 |
| 91 | 136.84 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 104 | 137.06 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 109 | 137.19 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 12 |
| 110 | 137.20 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 8 |
| 112 | 137.23 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 9 |
| 116 | 137.25 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 16 |
| 150 | 137.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 154 | 137.67 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 20 |
| 161 | 137.78 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 19 |
| 167 | 137.81 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 169 | 137.82 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 173 | 137.83 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 174 | 137.84 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 175 | 137.84 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 9 |
| 182 | 137.86 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 183 | 137.88 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 197 | 137.97 | humidity | 90.0 | 720 | > th | dose independent | rect. | 15 | 9 |
| 210 | 138.12 | humidity | 90.0 | 720 | > th | dose independent | rect. | 10 | 14 |
| 212 | 138.12 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 240 | 138.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 19 |
| 241 | 138.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 19 |
| 259 | 138.35 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 261 | 138.35 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 263 | 138.38 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 19 |
| 275 | 138.45 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 21 |
| 282 | 138.50 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 7 |
| 283 | 138.50 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 18 |
| 288 | 138.52 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 19 |
| 294 | 138.56 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 21 |
| 314 | 138.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 16 |
| 326 | 138.77 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 15 |
| 329 | 138.78 | humidity | 90.0 | 30 | < th | dose independent | rect. | 18 | 15 |
| 349 | 138.85 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 353 | 138.87 | radiation | 1.0 | 90 | > th | dose independent | sin | 8 | NA |
| 357 | 138.88 | humidity | 60.0 | 270 | > th | dose independent | rect. | 16 | 16 |
| 361 | 138.90 | radiation | 1.0 | 90 | < th | dose independent | sin | 8 | NA |
| 371 | 138.93 | humidity | 90.0 | 720 | < th | dose independent | rect. | 10 | 14 |
| 386 | 138.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 387 | 138.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 388 | 138.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 389 | 138.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 393 | 138.99 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 401 | 138.99 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 418 | 139.06 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 7 |
| 432 | 139.09 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 18 |
| 456 | 139.17 | humidity | 90.0 | 30 | < th | dose independent | rect. | 16 | 17 |
| 471 | 139.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 5 |
| 472 | 139.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 476 | 139.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 21 |
| 477 | 139.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 21 |
| 478 | 139.24 | radiation | 30.0 | 270 | < th | dose independent | rect. | 3 | 7 |
| 482 | 139.26 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 488 | 139.26 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 7 |
| 545 | 139.40 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 17 | 7 |
| 547 | 139.40 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 553 | 139.42 | wind | 7.0 | 270 | < th | dose independent | rect. | 8 | 9 |
| 561 | 139.43 | radiation | 10.0 | 30 | < th | dose dependent | sin | 8 | NA |
| 564 | 139.44 | humidity | 90.0 | 720 | > th | dose independent | rect. | 5 | 19 |
| 567 | 139.45 | humidity | 90.0 | 720 | > th | dose independent | sin | 17 | NA |
| 572 | 139.47 | humidity | 90.0 | 30 | > th | dose independent | rect. | 23 | 5 |
| 612 | 139.55 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 8 |
| 638 | 139.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 647 | 139.62 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 20 | 21 |
| 654 | 139.63 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 18 |
| 655 | 139.63 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 20 |
| 668 | 139.67 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 16 | 8 |
| 724 | 139.77 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 731 | 139.79 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 14 | 8 |
| 743 | 139.82 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 8 |
| 762 | 139.85 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 780 | 139.88 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 9 | 15 |
| 796 | 139.92 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 799 | 139.93 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 17 |
| 816 | 139.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 817 | 139.97 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 818 | 139.97 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 822 | 139.97 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 827 | 139.97 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 832 | 139.97 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 3 |
| 848 | 139.98 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 849 | 139.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 9 |
| 852 | 139.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 871 | 140.01 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 16 | 17 |
| 882 | 140.02 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 21 |
| 891 | 140.04 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 17 |
| 907 | 140.06 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 17 |
| 914 | 140.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 942 | 140.10 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 8 |
| 945 | 140.11 | humidity | 90.0 | 30 | < th | dose independent | rect. | 3 | 6 |
| 955 | 140.12 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 3 |
| 962 | 140.12 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 3 |
| 983 | 140.15 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 17 |
| 988 | 140.16 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 993 | 140.16 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 19 |
| 999 | 140.16 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 6 | 17 |