Os01g0811200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0811200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.76 | 0.204 | 9.97 | 0.558 | 0.128 | 0.269 | -0.614 | 1.23 | -0.0126 | 7.16 | 21.24 | 1450 | -- | -- |
| 21.48 | 0.218 | 10 | 0.295 | 0.13 | 0.15 | -0.621 | -- | -0.0657 | 6.76 | 21.24 | 1450 | -- | -- |
| 19.61 | 0.206 | 9.96 | 0.607 | 0.142 | 0.259 | -- | 1.31 | 0.00521 | 7.11 | 21.5 | 1837 | -- | -- |
| 22.33 | 0.22 | 10 | 0.239 | 0.141 | 0.225 | -- | -- | -0.0988 | 8.55 | 24.71 | 2478 | -- | -- |
| 20.5 | 0.211 | 9.97 | 0.591 | -- | 0.225 | -- | 1.22 | 0.00369 | -- | 21.64 | 1693 | -- | -- |
| 22.67 | 0.223 | 10 | 0.334 | 0.13 | -- | -0.609 | -- | -0.0316 | 7.21 | -- | -- | -- | -- |
| 23.65 | 0.228 | 10 | 0.321 | 0.128 | -- | -- | -- | -0.0301 | 7.58 | -- | -- | -- | -- |
| 22.98 | 0.223 | 10 | 0.264 | -- | 0.198 | -- | -- | -0.00433 | -- | 31.4 | 4047 | -- | -- |
| 23.74 | 0.227 | 10 | -- | 0.153 | 0.289 | -- | -- | -0.121 | 7.68 | 24.7 | 3525 | -- | -- |
| 24.54 | 0.231 | 10 | 0.323 | -- | -- | -- | -- | -0.0281 | -- | -- | -- | -- | -- |
| 26.37 | 0.24 | 10 | -- | 0.131 | -- | -- | -- | -0.0659 | 7.42 | -- | -- | -- | -- |
| 24.15 | 0.229 | 10 | -- | -- | 0.262 | -- | -- | -0.164 | -- | 23.98 | 47520 | -- | -- |
| 27.29 | 0.244 | 10 | -- | -- | -- | -- | -- | -0.064 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.52 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 2 | 18.58 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 3 | 18.59 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 4 | 18.60 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 5 | 18.63 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 10 | 18.69 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 14 | 18.70 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 18 | 18.73 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 22 | 18.77 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 28 | 18.79 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 30 | 18.80 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 37 | 18.82 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 128 | 19.01 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 17 |
| 164 | 19.06 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 212 | 19.11 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 223 | 19.12 | temperature | 25.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 264 | 19.14 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 284 | 19.16 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 295 | 19.17 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 300 | 19.17 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 341 | 19.20 | temperature | 20.0 | 720 | < th | dose independent | sin | 20 | NA |
| 388 | 19.22 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 395 | 19.22 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 12 |
| 397 | 19.22 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 456 | 19.24 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 16 | 14 |
| 464 | 19.24 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 465 | 19.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 479 | 19.25 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 539 | 19.27 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 562 | 19.28 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 611 | 19.29 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 617 | 19.29 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 620 | 19.29 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 647 | 19.30 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 652 | 19.30 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 664 | 19.30 | temperature | 20.0 | 720 | < th | dose independent | rect. | 8 | 15 |
| 678 | 19.31 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 739 | 19.32 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 807 | 19.34 | temperature | 20.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 840 | 19.34 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 852 | 19.35 | temperature | 20.0 | 720 | < th | dose independent | rect. | 11 | 12 |
| 858 | 19.35 | temperature | 20.0 | 720 | < th | dose independent | rect. | 6 | 17 |
| 868 | 19.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 883 | 19.36 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 915 | 19.37 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 924 | 19.37 | temperature | 20.0 | 720 | < th | dose independent | rect. | 14 | 9 |
| 956 | 19.38 | temperature | 20.0 | 720 | < th | dose independent | rect. | 16 | 7 |
| 985 | 19.39 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 990 | 19.39 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 4 |