Os01g0800300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0800300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.94 | 0.315 | 9.38 | 0.612 | 0.559 | -0.178 | 0.211 | 3.03 | -0.154 | 6.84 | 19.38 | 3766 | -- | -- |
| 51.87 | 0.335 | 9.49 | -0.159 | 0.56 | -0.23 | 0.249 | -- | -0.351 | 6.73 | 12.5 | 8055 | -- | -- |
| 45.03 | 0.313 | 9.39 | 0.586 | 0.562 | -0.164 | -- | 2.94 | -0.163 | 6.83 | 18.83 | 3826 | -- | -- |
| 51.82 | 0.335 | 9.49 | -0.111 | 0.563 | -0.279 | -- | -- | -0.324 | 6.82 | 10.4 | 9066 | -- | -- |
| 61.44 | 0.365 | 9.4 | 0.623 | -- | -0.219 | -- | 2.97 | -0.139 | -- | 19.15 | 3663 | -- | -- |
| 52.97 | 0.341 | 9.51 | -0.266 | 0.565 | -- | 0.143 | -- | -0.408 | 6.85 | -- | -- | -- | -- |
| 53.02 | 0.341 | 9.51 | -0.263 | 0.565 | -- | -- | -- | -0.409 | 6.86 | -- | -- | -- | -- |
| 67.34 | 0.384 | 9.51 | -0.175 | -- | -0.411 | -- | -- | -0.343 | -- | 7.285 | 47520 | -- | -- |
| 52.07 | 0.336 | 9.48 | -- | 0.573 | -0.321 | -- | -- | -0.304 | 6.75 | 10.55 | 9787 | -- | -- |
| 69.75 | 0.39 | 9.52 | -0.251 | -- | -- | -- | -- | -0.398 | -- | -- | -- | -- | -- |
| 54.85 | 0.346 | 9.5 | -- | 0.562 | -- | -- | -- | -0.379 | 6.89 | -- | -- | -- | -- |
| 68.08 | 0.386 | 9.5 | -- | -- | -0.469 | -- | -- | -0.317 | -- | 7.299 | 47520 | -- | -- |
| 71.42 | 0.394 | 9.51 | -- | -- | -- | -- | -- | -0.37 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.11 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 44.57 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 3 | 44.80 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 7 |
| 4 | 44.81 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 5 | 44.81 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 9 | 44.85 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 10 | 44.87 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 15 | 44.91 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 22 | 44.96 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 33 | 44.98 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 16 |
| 42 | 45.02 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 72 | 45.10 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 76 | 45.11 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 7 |
| 78 | 45.12 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 79 | 45.12 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 85 | 45.15 | temperature | 15 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 109 | 45.19 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 18 |
| 110 | 45.20 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 121 | 45.21 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 10 |
| 126 | 45.22 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 12 |
| 143 | 45.24 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 175 | 45.27 | temperature | 25 | 4320 | > th | dose dependent | sin | 14 | NA |
| 178 | 45.27 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 3 |
| 192 | 45.28 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 226 | 45.31 | temperature | 20 | 4320 | > th | dose dependent | sin | 18 | NA |
| 229 | 45.31 | temperature | 30 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 248 | 45.33 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 275 | 45.34 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 323 | 45.36 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 434 | 45.43 | temperature | 20 | 4320 | > th | dose independent | sin | 13 | NA |
| 437 | 45.43 | temperature | 15 | 4320 | > th | dose dependent | sin | 12 | NA |
| 465 | 45.44 | atmosphere | 995 | 43200 | > th | dose independent | sin | 6 | NA |
| 466 | 45.44 | atmosphere | 995 | 43200 | < th | dose independent | sin | 6 | NA |
| 470 | 45.44 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 527 | 45.46 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 15 |
| 538 | 45.47 | atmosphere | 1010 | 720 | < th | dose independent | rect. | 16 | 9 |
| 581 | 45.48 | temperature | 30 | 4320 | < th | dose dependent | sin | 11 | NA |
| 619 | 45.48 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 11 | 21 |
| 621 | 45.49 | temperature | 20 | 4320 | < th | dose independent | sin | 12 | NA |
| 673 | 45.50 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 11 | 18 |
| 721 | 45.52 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 756 | 45.52 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 19 |
| 844 | 45.55 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 894 | 45.56 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 898 | 45.56 | humidity | 60 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 939 | 45.57 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 11 |
| 941 | 45.57 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 22 | 15 |
| 946 | 45.57 | temperature | 20 | 4320 | > th | dose dependent | rect. | 11 | 3 |