Os01g0797800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0797800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.89 | 0.628 | 3.33 | -0.163 | 0.971 | 15.6 | -0.405 | 33.5 | -0.114 | 5.82 | 1016 | 1569 | -- | -- |
| 198.98 | 0.657 | 3.21 | -0.366 | 0.991 | -0.581 | -0.622 | -- | -0.122 | 5.74 | 1018 | 1656 | -- | -- |
| 178.91 | 0.623 | 3.33 | -0.163 | 0.955 | 16.3 | -- | 34.9 | -0.117 | 5.86 | 1016 | 1556 | -- | -- |
| 196.7 | 0.653 | 3.21 | -0.412 | 0.974 | -0.511 | -- | -- | -0.139 | 5.94 | 1018 | 4880 | -- | -- |
| 227.24 | 0.702 | 3.36 | -0.0819 | -- | 18.5 | -- | 39.4 | -0.0671 | -- | 1016 | 1566 | -- | -- |
| 199.74 | 0.663 | 3.21 | -0.341 | 0.99 | -- | -0.253 | -- | -0.113 | 5.93 | -- | -- | -- | -- |
| 199.89 | 0.662 | 3.21 | -0.342 | 0.988 | -- | -- | -- | -0.112 | 5.96 | -- | -- | -- | -- |
| 246 | 0.73 | 3.22 | -0.413 | -- | -0.501 | -- | -- | -0.106 | -- | 1018 | 4652 | -- | -- |
| 201.99 | 0.662 | 3.2 | -- | 0.983 | -0.373 | -- | -- | -0.0814 | 6.01 | 1018 | 3851 | -- | -- |
| 250.52 | 0.74 | 3.22 | -0.313 | -- | -- | -- | -- | -0.0891 | -- | -- | -- | -- | -- |
| 202.98 | 0.666 | 3.2 | -- | 0.983 | -- | -- | -- | -0.0736 | 5.98 | -- | -- | -- | -- |
| 251.02 | 0.738 | 3.22 | -- | -- | -0.384 | -- | -- | -0.0684 | -- | 1018 | 4638 | -- | -- |
| 253.1 | 0.743 | 3.21 | -- | -- | -- | -- | -- | -0.0543 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 176.93 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 6 | 177.08 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 7 | 177.11 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 19 | 177.65 | atmosphere | 1010 | 270 | > th | dose independent | rect. | 5 | 1 |
| 33 | 177.93 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 34 | 177.93 | atmosphere | 1010 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 46 | 178.07 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 62 | 178.07 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 82 | 178.20 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 96 | 178.92 | atmosphere | 1010 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 128 | 179.75 | atmosphere | 1015 | 1440 | > th | dose dependent | sin | 3 | NA |
| 176 | 180.08 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 297 | 182.20 | atmosphere | 1015 | 1440 | > th | dose independent | sin | 3 | NA |
| 358 | 182.97 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 10 | 10 |
| 387 | 182.99 | temperature | 25 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 421 | 183.21 | atmosphere | 1015 | 1440 | < th | dose independent | sin | 3 | NA |
| 511 | 184.62 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 9 |
| 518 | 184.68 | wind | 1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 527 | 184.88 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 544 | 185.19 | temperature | 20 | 30 | > th | dose independent | rect. | 3 | 8 |
| 579 | 185.76 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 587 | 186.11 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 591 | 186.24 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 595 | 186.32 | temperature | 25 | 720 | > th | dose independent | rect. | 23 | 5 |
| 624 | 186.69 | temperature | 20 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 633 | 186.81 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 648 | 187.01 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 651 | 187.04 | radiation | 40 | 30 | < th | dose independent | rect. | 4 | 7 |
| 658 | 187.14 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 8 |
| 664 | 187.22 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 666 | 187.22 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 22 |
| 667 | 187.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 693 | 187.32 | temperature | 25 | 720 | > th | dose independent | rect. | 2 | 1 |
| 694 | 187.33 | temperature | 20 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 696 | 187.34 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 712 | 187.45 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 722 | 187.49 | temperature | 20 | 10 | > th | dose independent | rect. | 14 | 21 |
| 724 | 187.50 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 747 | 187.68 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 5 |
| 790 | 188.02 | wind | 1 | 30 | > th | dose independent | rect. | 24 | 14 |
| 793 | 188.05 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 7 |
| 833 | 188.33 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 846 | 188.42 | wind | 7 | 30 | < th | dose dependent | rect. | 4 | 7 |
| 860 | 188.51 | radiation | 20 | 90 | < th | dose independent | rect. | 8 | 2 |
| 872 | 188.57 | temperature | 20 | 10 | > th | dose independent | rect. | 14 | 19 |
| 876 | 188.58 | humidity | 90 | 270 | > th | dose independent | rect. | 4 | 2 |