Os01g0794100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0794100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 412.88 | 0.955 | 6.69 | -1.95 | 1.68 | 2.23 | 2.22 | -3.53 | -0.505 | 13.5 | 99.71 | 40 | 6.23 | 11.9 |
| 423.14 | 0.965 | 6.7 | -1.86 | 1.4 | 2.44 | -0.263 | -- | -0.522 | 14.2 | 112.1 | 29 | 6.1 | 12.2 |
| 418.61 | 0.953 | 6.69 | -1.87 | 1.61 | 2.23 | -- | -1.21 | -0.499 | 13.7 | 102.8 | 35 | 6.38 | 11.7 |
| 421.19 | 0.956 | 6.7 | -1.87 | 1.44 | 2.33 | -- | -- | -0.519 | 13.9 | 109.7 | 27 | 6.1 | 12.1 |
| 443.24 | 0.981 | 6.71 | -1.95 | -- | 3.49 | -- | -0.746 | -0.49 | -- | 123.4 | 43 | 6.45 | 11.6 |
| 480.41 | 1.03 | 6.67 | -1.84 | 3.19 | -- | 0.146 | -- | -0.484 | 13.5 | -- | -- | -- | -- |
| 480.5 | 1.03 | 6.67 | -1.84 | 3.19 | -- | -- | -- | -0.483 | 13.5 | -- | -- | -- | -- |
| 444.69 | 0.982 | 6.7 | -1.9 | -- | 3.41 | -- | -- | -0.503 | -- | 126.4 | 42 | 6.51 | 11.6 |
| 514.42 | 1.06 | 6.66 | -- | 1.42 | 2.29 | -- | -- | -0.327 | 14 | 114.9 | 29 | 6.22 | 11.9 |
| 1105.8 | 1.55 | 6.71 | -1.96 | -- | -- | -- | -- | -0.552 | -- | -- | -- | -- | -- |
| 569.36 | 1.12 | 6.63 | -- | 3.23 | -- | -- | -- | -0.279 | 13.5 | -- | -- | -- | -- |
| 538.88 | 1.08 | 6.66 | -- | -- | 3.34 | -- | -- | -0.301 | -- | 132.5 | 44 | 6.52 | 11.5 |
| 1207.52 | 1.62 | 6.67 | -- | -- | -- | -- | -- | -0.334 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 420.89 | humidity | 90 | 30 | < th | dose dependent | rect. | 6 | 12 |
| 2 | 421.35 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 5 | 422.91 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 9 | 423.90 | temperature | 20 | 30 | > th | dose independent | rect. | 24 | 18 |
| 10 | 423.98 | humidity | 90 | 30 | < th | dose dependent | rect. | 24 | 18 |
| 15 | 425.26 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 16 | 425.47 | radiation | 40 | 30 | < th | dose dependent | rect. | 18 | 20 |
| 18 | 425.60 | temperature | 20 | 30 | > th | dose independent | rect. | 22 | 20 |
| 24 | 426.70 | humidity | 80 | 30 | < th | dose independent | rect. | 11 | 7 |
| 25 | 426.86 | humidity | 90 | 30 | < th | dose dependent | rect. | 11 | 7 |
| 30 | 427.51 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 31 | 427.51 | wind | 3 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 32 | 427.55 | humidity | 90 | 30 | < th | dose dependent | rect. | 21 | 21 |
| 46 | 428.68 | humidity | 50 | 10 | > th | dose dependent | rect. | 18 | 21 |
| 49 | 428.88 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 56 | 429.48 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 60 | 429.56 | temperature | 20 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 62 | 429.81 | radiation | 30 | 30 | < th | dose independent | rect. | 18 | 20 |
| 67 | 430.25 | wind | 3 | 43200 | < th | dose dependent | rect. | 13 | 3 |
| 71 | 430.45 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 72 | 430.49 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 15 |
| 78 | 430.56 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 85 | 430.87 | humidity | 90 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 88 | 430.93 | humidity | 70 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 92 | 431.13 | humidity | 80 | 43200 | > th | dose independent | rect. | 22 | 19 |
| 95 | 431.23 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 19 |
| 97 | 431.24 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 99 | 431.32 | radiation | 40 | 30 | < th | dose dependent | rect. | 18 | 18 |
| 108 | 431.47 | temperature | 25 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 112 | 431.64 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 115 | 431.77 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 117 | 431.80 | humidity | 80 | 43200 | < th | dose independent | rect. | 1 | 15 |
| 123 | 431.90 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 134 | 431.99 | temperature | 20 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 148 | 432.19 | temperature | 20 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 157 | 432.27 | temperature | 25 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 158 | 432.27 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 159 | 432.27 | temperature | 20 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 160 | 432.28 | temperature | 10 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 164 | 432.32 | temperature | 30 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 236 | 432.79 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 275 | 432.91 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 294 | 432.99 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 298 | 433.01 | humidity | 80 | 43200 | > th | dose independent | rect. | 1 | 15 |
| 299 | 433.01 | temperature | 20 | 14400 | < th | dose dependent | sin | 0 | NA |
| 304 | 433.04 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 10 |
| 352 | 433.16 | humidity | 70 | 43200 | > th | dose dependent | rect. | 21 | 19 |
| 401 | 433.30 | temperature | 30 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 420 | 433.34 | temperature | 10 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 450 | 433.39 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 507 | 433.48 | temperature | 25 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 515 | 433.50 | wind | 1 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 575 | 433.60 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 10 |
| 596 | 433.65 | temperature | 20 | 43200 | > th | dose dependent | sin | 7 | NA |
| 645 | 433.74 | temperature | 10 | 43200 | > th | dose dependent | sin | 6 | NA |
| 646 | 433.74 | humidity | 70 | 43200 | > th | dose dependent | sin | 6 | NA |
| 659 | 433.76 | temperature | 25 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 660 | 433.76 | humidity | 90 | 30 | < th | dose dependent | sin | 21 | NA |
| 725 | 433.84 | wind | 1 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 739 | 433.86 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 751 | 433.88 | temperature | 30 | 43200 | < th | dose dependent | sin | 7 | NA |
| 766 | 433.91 | humidity | 70 | 43200 | > th | dose dependent | rect. | 21 | 8 |
| 790 | 433.95 | temperature | 25 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 853 | 434.04 | humidity | 80 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 874 | 434.06 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 984 | 434.22 | humidity | 50 | 43200 | > th | dose dependent | rect. | 22 | 7 |
| 998 | 434.24 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 12 |