Os01g0793300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tyrosinase family protein.
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Os01g0793300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tyrosinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 695.34 | 1.24 | 3.79 | -3.29 | 1.31 | -1.44 | -4.95 | 7.46 | -0.418 | 5.95 | 8.703 | 1601 | -- | -- |
| 697.56 | 1.23 | 3.83 | -2.97 | 1.36 | -2.69 | -4.58 | -- | -0.326 | 5.86 | 9.071 | 1852 | -- | -- |
| 754.21 | 1.28 | 3.78 | -3.33 | 1.27 | -1.42 | -- | 7.62 | -0.395 | 6.02 | 8.703 | 1514 | -- | -- |
| 757.81 | 1.28 | 3.82 | -3.04 | 1.36 | -2.67 | -- | -- | -0.385 | 5.93 | 9.1 | 1789 | -- | -- |
| 834.31 | 1.35 | 3.79 | -3.24 | -- | -1.55 | -- | 7.72 | -0.374 | -- | 8.4 | 1301 | -- | -- |
| 789.72 | 1.32 | 3.91 | -3.62 | 1.27 | -- | -4.76 | -- | -0.653 | 5.85 | -- | -- | -- | -- |
| 845.05 | 1.36 | 3.9 | -3.65 | 1.24 | -- | -- | -- | -0.634 | 6 | -- | -- | -- | -- |
| 835.97 | 1.35 | 3.88 | -3.06 | -- | -3.31 | -- | -- | -0.358 | -- | 8.4 | 1297 | -- | -- |
| 996.95 | 1.47 | 3.78 | -- | 1.22 | -3.48 | -- | -- | -0.0952 | 6.43 | 9.001 | 1788 | -- | -- |
| 925.05 | 1.42 | 3.92 | -3.62 | -- | -- | -- | -- | -0.605 | -- | -- | -- | -- | -- |
| 1196.54 | 1.62 | 3.81 | -- | 1.19 | -- | -- | -- | -0.227 | 6.15 | -- | -- | -- | -- |
| 1044.64 | 1.51 | 3.77 | -- | -- | -4.53 | -- | -- | 0.0484 | -- | 6.9 | 1262 | -- | -- |
| 1269.85 | 1.66 | 3.83 | -- | -- | -- | -- | -- | -0.204 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 686.88 | wind | 9 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 3 | 687.73 | wind | 9 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 5 | 688.04 | wind | 9 | 1440 | > th | dose dependent | rect. | 14 | 2 |
| 14 | 692.92 | wind | 1 | 1440 | > th | dose dependent | rect. | 22 | 18 |
| 17 | 693.52 | wind | 9 | 1440 | < th | dose independent | rect. | 12 | 14 |
| 19 | 693.75 | wind | 9 | 1440 | < th | dose dependent | rect. | 22 | 18 |
| 24 | 694.28 | wind | 9 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 28 | 694.75 | wind | 9 | 1440 | < th | dose independent | rect. | 12 | 20 |
| 30 | 694.83 | wind | 9 | 1440 | > th | dose dependent | rect. | 12 | 14 |
| 43 | 695.04 | wind | 9 | 1440 | > th | dose independent | rect. | 12 | 14 |
| 51 | 695.07 | wind | 9 | 1440 | > th | dose dependent | rect. | 12 | 11 |
| 59 | 695.41 | wind | 9 | 1440 | > th | dose independent | rect. | 12 | 11 |
| 179 | 698.98 | wind | 9 | 1440 | < th | dose independent | sin | 17 | NA |
| 207 | 699.22 | wind | 9 | 1440 | > th | dose dependent | sin | 16 | NA |
| 248 | 699.74 | wind | 9 | 1440 | > th | dose independent | sin | 17 | NA |
| 294 | 700.30 | wind | 9 | 1440 | < th | dose independent | rect. | 22 | 4 |
| 311 | 700.50 | wind | 7 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 319 | 700.58 | wind | 7 | 1440 | > th | dose dependent | rect. | 21 | 20 |
| 342 | 700.89 | wind | 9 | 1440 | < th | dose independent | rect. | 7 | 19 |
| 379 | 701.32 | wind | 9 | 1440 | < th | dose independent | rect. | 5 | 21 |
| 384 | 701.36 | wind | 7 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 422 | 701.53 | wind | 9 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 429 | 701.57 | wind | 7 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 431 | 701.58 | wind | 7 | 1440 | > th | dose dependent | no | NA | NA |
| 433 | 701.58 | wind | 7 | 1440 | > th | dose dependent | rect. | 7 | 22 |
| 447 | 701.63 | wind | 7 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 462 | 701.74 | wind | 9 | 1440 | < th | dose independent | rect. | 21 | 23 |
| 506 | 701.93 | wind | 1 | 1440 | > th | dose dependent | rect. | 12 | 23 |
| 511 | 701.98 | wind | 9 | 1440 | < th | dose independent | no | NA | NA |
| 514 | 701.98 | wind | 1 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 524 | 702.02 | wind | 9 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 529 | 702.04 | wind | 1 | 1440 | > th | dose dependent | no | NA | NA |
| 541 | 702.10 | wind | 1 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 548 | 702.14 | wind | 1 | 1440 | > th | dose dependent | sin | 4 | NA |
| 550 | 702.15 | wind | 9 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 554 | 702.17 | wind | 9 | 1440 | > th | dose independent | rect. | 21 | 23 |
| 560 | 702.21 | wind | 9 | 270 | < th | dose dependent | rect. | 20 | 15 |
| 571 | 702.32 | wind | 7 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 572 | 702.33 | wind | 9 | 1440 | > th | dose independent | no | NA | NA |
| 588 | 702.33 | wind | 9 | 1440 | > th | dose independent | rect. | 1 | 22 |
| 613 | 702.37 | wind | 1 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 628 | 702.45 | wind | 9 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 663 | 702.64 | wind | 1 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 723 | 702.85 | wind | 9 | 1440 | < th | dose dependent | sin | 4 | NA |
| 736 | 702.96 | wind | 9 | 1440 | < th | dose dependent | rect. | 14 | 23 |
| 738 | 702.98 | wind | 9 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 744 | 703.01 | wind | 9 | 1440 | < th | dose dependent | no | NA | NA |
| 753 | 703.03 | wind | 9 | 1440 | < th | dose dependent | rect. | 12 | 23 |
| 770 | 703.18 | wind | 1 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 772 | 703.20 | wind | 9 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 775 | 703.21 | wind | 9 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 804 | 703.57 | wind | 5 | 720 | < th | dose independent | rect. | 19 | 21 |
| 825 | 703.70 | wind | 9 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 840 | 703.74 | wind | 5 | 720 | > th | dose independent | rect. | 19 | 18 |