Os01g0784000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0784000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 239.07 | 0.726 | 6.69 | 1.06 | 0.475 | -2.04 | 1.7 | -2.54 | -0.076 | 8.91 | 21.4 | 1374 | -- | -- |
| 245.49 | 0.73 | 6.61 | 1.52 | 0.331 | -1.64 | 1.73 | -- | 0.0905 | 8.62 | 22.1 | 1108 | -- | -- |
| 240.81 | 0.723 | 6.65 | 0.966 | 0.335 | -1.65 | -- | -2.02 | -0.0854 | 8.89 | 22 | 1006 | -- | -- |
| 255.28 | 0.744 | 6.61 | 1.58 | 0.28 | -1.64 | -- | -- | 0.0825 | 8.38 | 22.12 | 1015 | -- | -- |
| 242.42 | 0.725 | 6.68 | 0.892 | -- | -1.75 | -- | -2.36 | -0.0942 | -- | 22 | 879 | -- | -- |
| 354.12 | 0.882 | 6.73 | 0.946 | 0.507 | -- | 1.63 | -- | -0.463 | 9.32 | -- | -- | -- | -- |
| 363.32 | 0.893 | 6.73 | 1.01 | 0.499 | -- | -- | -- | -0.459 | 9.95 | -- | -- | -- | -- |
| 259.07 | 0.75 | 6.62 | 1.59 | -- | -1.67 | -- | -- | 0.0957 | -- | 22.1 | 966 | -- | -- |
| 313.65 | 0.825 | 6.67 | -- | 0.291 | -1.29 | -- | -- | -0.169 | 8.12 | 22.4 | 948 | -- | -- |
| 378.3 | 0.909 | 6.74 | 1 | -- | -- | -- | -- | -0.459 | -- | -- | -- | -- | -- |
| 390.13 | 0.924 | 6.75 | -- | 0.496 | -- | -- | -- | -0.572 | 9.8 | -- | -- | -- | -- |
| 317.6 | 0.83 | 6.67 | -- | -- | -1.31 | -- | -- | -0.165 | -- | 22.3 | 859 | -- | -- |
| 404.82 | 0.939 | 6.77 | -- | -- | -- | -- | -- | -0.571 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 244.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 12 |
| 8 | 245.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 10 | 245.39 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 13 | 245.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 18 | 245.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 33 | 246.15 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 43 | 246.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 44 | 246.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 47 | 246.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 49 | 246.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 59 | 246.60 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 80 | 246.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 115 | 247.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 350 | 252.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 446 | 254.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 462 | 254.89 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 481 | 255.24 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 517 | 255.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 521 | 255.84 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 6 |
| 545 | 256.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 611 | 256.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 721 | 257.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 885 | 259.44 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 888 | 259.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 922 | 259.86 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |