Os01g0780600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0780600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.26 | 0.302 | 3.22 | 0.139 | 0.166 | 0.438 | -0.317 | 4.54 | -0.0304 | 7.16 | 0.2059 | 9 | -- | -- |
| 41.19 | 0.299 | 3.22 | 0.137 | 0.163 | 1.78 | -0.304 | -- | -0.0263 | 7.28 | -0.006132 | 5 | -- | -- |
| 41.37 | 0.3 | 3.22 | 0.134 | 0.173 | 0.697 | -- | 3.67 | -0.0311 | 7.95 | -0.3369 | 7 | -- | -- |
| 41.37 | 0.3 | 3.22 | 0.128 | 0.161 | 1.8 | -- | -- | -0.0255 | 8.06 | -0.08926 | 5 | -- | -- |
| 42.88 | 0.305 | 3.22 | 0.133 | -- | 0.884 | -- | 3.1 | -0.0258 | -- | 0.09582 | 7 | -- | -- |
| 44.67 | 0.313 | 3.22 | 0.159 | 0.167 | -- | -0.324 | -- | -0.0343 | 7.11 | -- | -- | -- | -- |
| 44.91 | 0.314 | 3.22 | 0.153 | 0.166 | -- | -- | -- | -0.0331 | 7.64 | -- | -- | -- | -- |
| 42.79 | 0.305 | 3.23 | 0.13 | -- | 1.81 | -- | -- | -0.0234 | -- | -0.0811 | 5 | -- | -- |
| 41.8 | 0.301 | 3.22 | -- | 0.162 | 1.84 | -- | -- | -0.0395 | 8.02 | -0.04198 | 5 | -- | -- |
| 46.4 | 0.318 | 3.23 | 0.156 | -- | -- | -- | -- | -0.0306 | -- | -- | -- | -- | -- |
| 45.53 | 0.316 | 3.23 | -- | 0.168 | -- | -- | -- | -0.0502 | 7.58 | -- | -- | -- | -- |
| 43.23 | 0.306 | 3.23 | -- | -- | 1.85 | -- | -- | -0.0376 | -- | -0.05159 | 5 | -- | -- |
| 47.04 | 0.32 | 3.23 | -- | -- | -- | -- | -- | -0.0479 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.96 | humidity | 90.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 11 | 36.96 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 21 | 37.07 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 49 | 37.07 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 111 | 39.50 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 14 |
| 115 | 40.16 | humidity | 90.0 | 270 | > th | dose independent | rect. | 15 | 1 |
| 116 | 40.16 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 123 | 40.43 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 124 | 40.55 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 14 |
| 126 | 40.60 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 0 | NA |
| 131 | 40.62 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 23 |
| 132 | 40.62 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 133 | 40.63 | precipitation | 0.1 | 10 | > th | dose independent | sin | 0 | NA |
| 134 | 40.69 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 135 | 40.72 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 136 | 40.77 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 23 | 19 |
| 138 | 40.77 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 145 | 40.82 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 156 | 40.95 | temperature | 25.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 158 | 40.95 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 168 | 41.00 | precipitation | 0.1 | 10 | < th | dose independent | sin | 1 | NA |
| 169 | 41.00 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 1 | NA |
| 183 | 41.09 | radiation | 1.0 | 90 | < th | dose independent | rect. | 9 | 8 |
| 185 | 41.10 | radiation | 1.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 190 | 41.10 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 192 | 41.11 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 11 | 23 |
| 199 | 41.11 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 200 | 41.13 | radiation | 1.0 | 90 | < th | dose independent | rect. | 12 | 5 |
| 236 | 41.23 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 265 | 41.34 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 282 | 41.39 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 12 |
| 319 | 41.42 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 331 | 41.44 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 348 | 41.45 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 18 | 23 |
| 349 | 41.45 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |
| 351 | 41.45 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 404 | 41.45 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 407 | 41.46 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 462 | 41.53 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 21 | 23 |
| 465 | 41.53 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 468 | 41.54 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 12 |
| 481 | 41.54 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 485 | 41.55 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 508 | 41.55 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 510 | 41.55 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 515 | 41.57 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 522 | 41.58 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 529 | 41.58 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 536 | 41.59 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 4 | 8 |
| 538 | 41.59 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 24 | 12 |
| 543 | 41.59 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 3 | 9 |
| 563 | 41.60 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 571 | 41.61 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 577 | 41.62 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 3 |
| 584 | 41.62 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 585 | 41.62 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 10 |
| 586 | 41.63 | precipitation | 0.1 | 10 | > th | dose independent | no | NA | NA |
| 587 | 41.63 | precipitation | 0.1 | 10 | < th | dose independent | no | NA | NA |
| 588 | 41.63 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 668 | 41.63 | precipitation | 0.1 | 10 | < th | dose dependent | no | NA | NA |
| 703 | 41.64 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 712 | 41.64 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 14 |
| 747 | 41.67 | humidity | 70.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 749 | 41.67 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 805 | 41.67 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 936 | 41.70 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 9 | NA |