Os01g0778100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF966 family protein.
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Os01g0778100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF966 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 207.06 | 0.676 | 6.26 | 0.855 | 3.15 | 2.67 | 0.331 | -4.87 | 0.495 | 18.2 | 23.04 | 793 | -- | -- |
| 214.71 | 0.682 | 6.15 | 1.87 | 3.64 | 2.05 | 0.074 | -- | 0.763 | 18.2 | 22.43 | 988 | -- | -- |
| 203.94 | 0.665 | 6.28 | 0.685 | 3.54 | 2.54 | -- | -5.1 | 0.478 | 18.1 | 23.46 | 976 | -- | -- |
| 214.68 | 0.682 | 6.15 | 1.87 | 3.62 | 2.07 | -- | -- | 0.758 | 18.2 | 22.41 | 981 | -- | -- |
| 822.25 | 1.34 | 6.24 | 0.437 | -- | 3.21 | -- | -5.13 | 0.4 | -- | 24.4 | 2016 | -- | -- |
| 329.75 | 0.851 | 6.08 | 2.48 | 3.82 | -- | 0.0149 | -- | 1.13 | 18.7 | -- | -- | -- | -- |
| 329.75 | 0.85 | 6.08 | 2.48 | 3.82 | -- | -- | -- | 1.13 | 18.7 | -- | -- | -- | -- |
| 505.4 | 1.05 | 6.11 | 1.52 | -- | 4.53 | -- | -- | 0.554 | -- | 23.88 | 510 | -- | -- |
| 237.3 | 0.717 | 6.36 | -- | 3.85 | 2.97 | -- | -- | -0.113 | 18.7 | 14.3 | 14765 | -- | -- |
| 1092.9 | 1.54 | 6 | 2.39 | -- | -- | -- | -- | 1.06 | -- | -- | -- | -- | -- |
| 491.72 | 1.04 | 6.14 | -- | 3.79 | -- | -- | -- | 0.858 | 18.7 | -- | -- | -- | -- |
| 563.37 | 1.11 | 6.17 | -- | -- | 4.8 | -- | -- | 0.32 | -- | 23.6 | 512 | -- | -- |
| 1243.6 | 1.65 | 6.06 | -- | -- | -- | -- | -- | 0.793 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 201.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 6 | 205.04 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 19 | 205.95 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 28 | 207.37 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 34 | 207.59 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 52 | 208.85 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 54 | 208.87 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 58 | 208.90 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 83 | 209.89 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 16 |
| 94 | 210.05 | radiation | 1 | 43200 | < th | dose dependent | rect. | 11 | 18 |
| 100 | 210.24 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 101 | 210.25 | radiation | 1 | 43200 | < th | dose dependent | sin | 16 | NA |
| 102 | 210.28 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 9 |
| 103 | 210.29 | radiation | 1 | 43200 | < th | dose dependent | rect. | 14 | 5 |
| 108 | 210.31 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 151 | 210.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 14 |
| 152 | 210.56 | radiation | 1 | 43200 | < th | dose dependent | rect. | 11 | 12 |
| 153 | 210.57 | radiation | 1 | 43200 | < th | dose dependent | rect. | 11 | 8 |
| 163 | 210.62 | radiation | 1 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 176 | 210.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 13 |
| 195 | 211.04 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 229 | 211.75 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 259 | 211.94 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 264 | 212.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 277 | 212.23 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 18 |
| 282 | 212.28 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 18 |
| 306 | 212.66 | radiation | 1 | 43200 | > th | dose independent | sin | 17 | NA |
| 324 | 212.80 | radiation | 1 | 43200 | > th | dose independent | rect. | 13 | 6 |
| 339 | 212.87 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 343 | 212.90 | temperature | 10 | 720 | > th | dose dependent | sin | 19 | NA |
| 344 | 212.91 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 358 | 212.97 | radiation | 1 | 43200 | < th | dose independent | sin | 17 | NA |
| 359 | 212.97 | radiation | 1 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 361 | 212.97 | radiation | 1 | 720 | > th | dose independent | rect. | 16 | 14 |
| 367 | 212.98 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 22 |
| 375 | 213.00 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 9 |
| 390 | 213.01 | radiation | 1 | 43200 | < th | dose independent | rect. | 13 | 6 |
| 435 | 213.09 | radiation | 1 | 43200 | < th | dose independent | rect. | 11 | 14 |
| 456 | 213.14 | radiation | 1 | 43200 | < th | dose independent | rect. | 11 | 8 |
| 474 | 213.18 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 19 |
| 476 | 213.19 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 518 | 213.21 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 21 |
| 527 | 213.22 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 635 | 213.59 | temperature | 25 | 720 | < th | dose independent | rect. | 4 | 20 |
| 684 | 213.92 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 721 | 214.37 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 732 | 214.48 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 747 | 214.59 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 751 | 214.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 19 |
| 753 | 214.70 | temperature | 25 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 755 | 214.70 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 758 | 214.73 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 6 |
| 763 | 214.81 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 768 | 214.82 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 11 |
| 784 | 214.88 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 808 | 214.97 | temperature | 20 | 43200 | < th | dose independent | rect. | 12 | 19 |
| 830 | 215.02 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 18 |
| 856 | 215.07 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 868 | 215.09 | temperature | 20 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 887 | 215.14 | temperature | 20 | 43200 | < th | dose independent | sin | 14 | NA |
| 908 | 215.17 | temperature | 20 | 43200 | < th | dose independent | sin | 5 | NA |
| 910 | 215.17 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 931 | 215.20 | temperature | 20 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 951 | 215.23 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 982 | 215.26 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 10 |