Os01g0775600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lissencephaly type-1-like homology motif domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0775600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Lissencephaly type-1-like homology motif domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.13 | 0.157 | 10.8 | 0.112 | 0.0772 | 0.763 | 0.47 | 1.17 | -0.0787 | 23.2 | 24.8 | 797 | -- | -- |
| 12.49 | 0.165 | 10.8 | 0.303 | 0.105 | 0.648 | 0.237 | -- | -0.0448 | 21.4 | 27.8 | 659 | -- | -- |
| 11.99 | 0.161 | 10.8 | 0.138 | 0.091 | 0.746 | -- | 0.954 | -0.0851 | 24 | 24.79 | 810 | -- | -- |
| 12.17 | 0.162 | 10.7 | 0.258 | 0.185 | 0.712 | -- | -- | -0.0388 | 15.9 | 30.82 | 265 | -- | -- |
| 12.2 | 0.163 | 10.8 | 0.179 | -- | 0.74 | -- | 0.788 | -0.0668 | -- | 24.5 | 645 | -- | -- |
| 18.97 | 0.204 | 10.8 | 0.12 | 0.0244 | -- | -0.253 | -- | -0.173 | 11 | -- | -- | -- | -- |
| 19.2 | 0.205 | 10.8 | 0.109 | 0.0395 | -- | -- | -- | -0.175 | 7.87 | -- | -- | -- | -- |
| 13.01 | 0.168 | 10.7 | 0.279 | -- | 0.629 | -- | -- | -0.038 | -- | 25.8 | 548 | -- | -- |
| 14.23 | 0.176 | 10.8 | -- | 0.178 | 0.69 | -- | -- | -0.109 | 15.1 | 40.89 | 166 | -- | -- |
| 19.28 | 0.205 | 10.8 | 0.11 | -- | -- | -- | -- | -0.174 | -- | -- | -- | -- | -- |
| 19.51 | 0.207 | 10.8 | -- | 0.0403 | -- | -- | -- | -0.187 | 7.68 | -- | -- | -- | -- |
| 14.79 | 0.179 | 10.8 | -- | -- | 0.514 | -- | -- | -0.0894 | -- | 26.1 | 502 | -- | -- |
| 19.6 | 0.207 | 10.8 | -- | -- | -- | -- | -- | -0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 3 | 10.26 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 34 | 10.54 | temperature | 10 | 720 | > th | dose dependent | sin | 8 | NA |
| 48 | 10.58 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 68 | 10.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 211 | 11.09 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 22 |
| 265 | 11.18 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 316 | 11.25 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 323 | 11.27 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 327 | 11.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 429 | 11.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 447 | 11.49 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 454 | 11.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 12 |
| 528 | 11.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 576 | 11.71 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 10 |
| 596 | 11.73 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 657 | 11.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 20 |
| 806 | 12.00 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |