Os01g0771200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mal d 1-associated protein.
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Os01g0771200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Mal d 1-associated protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.44 | 0.28 | 12.3 | 0.0715 | 0.325 | -0.757 | 0.033 | -0.713 | 0.0277 | 6.19 | 10.97 | 77 | -- | -- |
| 37.87 | 0.289 | 12.3 | 0.0609 | 0.216 | -0.632 | 0.574 | -- | 0.0682 | 9.73 | 11.7 | 78 | -- | -- |
| 35.37 | 0.277 | 12.3 | 0.0734 | 0.305 | -0.762 | -- | -0.688 | 0.0241 | 6 | 11.19 | 67 | -- | -- |
| 38.2 | 0.288 | 12.3 | 0.0822 | 0.29 | -0.766 | -- | -- | 0.0226 | 6.13 | 12.19 | 62 | -- | -- |
| 38.08 | 0.289 | 12.3 | 0.0699 | -- | -0.76 | -- | -0.611 | 0.0663 | -- | 11.19 | 67 | -- | -- |
| 45.99 | 0.318 | 12.2 | 0.0581 | 0.877 | -- | 0.633 | -- | 0.0737 | 11.1 | -- | -- | -- | -- |
| 47.7 | 0.323 | 12.2 | 0.0837 | 0.874 | -- | -- | -- | 0.0757 | 11.1 | -- | -- | -- | -- |
| 39.92 | 0.296 | 12.3 | 0.0781 | -- | -0.774 | -- | -- | 0.0699 | -- | 12.72 | 28 | -- | -- |
| 38.37 | 0.289 | 12.3 | -- | 0.291 | -0.77 | -- | -- | 0.0127 | 6.1 | 12.41 | 62 | -- | -- |
| 95.29 | 0.456 | 12.3 | 0.0634 | -- | -- | -- | -- | 0.0687 | -- | -- | -- | -- | -- |
| 47.88 | 0.324 | 12.2 | -- | 0.873 | -- | -- | -- | 0.0664 | 11.1 | -- | -- | -- | -- |
| 39.45 | 0.293 | 12.3 | -- | -- | -0.782 | -- | -- | 0.059 | -- | 13.16 | 2 | -- | -- |
| 95.4 | 0.456 | 12.3 | -- | -- | -- | -- | -- | 0.0616 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.18 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 4 | 26.26 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 20 |
| 26 | 28.15 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 80 | 30.13 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 96 | 30.68 | temperature | 25.0 | 90 | < th | dose independent | rect. | 2 | 18 |
| 112 | 30.96 | temperature | 25.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 114 | 31.00 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 21 |
| 126 | 31.30 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 142 | 31.50 | radiation | 10.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 194 | 32.12 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 222 | 32.39 | radiation | 1.0 | 90 | > th | dose independent | sin | 2 | NA |
| 227 | 32.41 | radiation | 1.0 | 90 | < th | dose independent | sin | 2 | NA |
| 234 | 32.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 238 | 32.47 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 2 | 15 |
| 241 | 32.49 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 245 | 32.52 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 2 | 17 |
| 252 | 32.61 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 6 |
| 269 | 32.74 | radiation | 1.0 | 270 | > th | dose independent | sin | 7 | NA |
| 286 | 32.82 | radiation | 1.0 | 270 | < th | dose independent | sin | 7 | NA |
| 302 | 32.91 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 344 | 33.07 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 6 | 3 |
| 355 | 33.12 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 378 | 33.19 | temperature | 25.0 | 90 | > th | dose independent | rect. | 6 | 5 |
| 395 | 33.25 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 479 | 33.57 | temperature | 30.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 506 | 33.63 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 522 | 33.70 | humidity | 80.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 552 | 33.80 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 18 |
| 562 | 33.83 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 3 |
| 646 | 34.06 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 16 |
| 654 | 34.08 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 2 | 7 |
| 666 | 34.11 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 13 | 19 |
| 683 | 34.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 686 | 34.16 | temperature | 25.0 | 90 | > th | dose independent | sin | 5 | NA |
| 694 | 34.17 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 782 | 34.37 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 832 | 34.48 | temperature | 25.0 | 90 | < th | dose independent | rect. | 2 | 9 |
| 856 | 34.52 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 872 | 34.55 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 910 | 34.62 | wind | 7.0 | 90 | < th | dose independent | rect. | 6 | 20 |
| 921 | 34.63 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 20 |
| 945 | 34.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 971 | 34.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 19 |
| 973 | 34.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 976 | 34.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 21 |
| 982 | 34.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 988 | 34.76 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 21 |