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Os01g0768700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.96 (0.0219) R2 : 0.802
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.29 (0.0579) R2dC : 0.258 R2C : 0.492
β3 : 1.99 (0.083) R2dE : 0.31 R2E : 0.543
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0195 (0.0461) R2dN8 : 0.000483 R2N8 : -0.00017
σ : 0.411
deviance : 77.81
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C
peak time of C : 13.4
E
wheather : temperature
threshold : 7.737
memory length : 229
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 6.2
open length of G : 19.8

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
62.25 0.371 8.94 0.799 1.28 1.88 -0.968 1.43 0.0278 13.4 8.913 242 6.13 19.4
64.08 0.373 8.94 0.728 1.29 1.92 -0.861 -- 0.0351 13.4 8.122 224 6.28 19.5
65.56 0.377 8.95 0.757 1.29 1.84 -- 1.06 0.0282 13.5 9.555 222 6.32 19.6
65.56 0.377 8.95 0.692 1.31 1.85 -- -- 0.0166 13.6 7.35 226 6.25 19.6
120.76 0.512 8.92 0.629 -- 2.45 -- 0.939 0.0775 -- 13.09 57 7.59 17.9
100.32 0.47 8.95 0.919 2.2 -- -0.0683 -- 0.124 15.3 -- -- -- --
100.34 0.469 8.95 0.918 2.2 -- -- -- 0.123 15.3 -- -- -- --
98.84 0.463 8.94 0.646 -- 2.29 -- -- 0.0758 -- 13.37 87 7.63 15.6
77.81 0.411 8.96 -- 1.29 1.99 -- -- -0.0195 13.4 7.737 229 6.2 19.8
374.12 0.904 8.95 0.824 -- -- -- -- 0.0654 -- -- -- -- --
122.52 0.518 8.97 -- 2.18 -- -- -- 0.021 15.3 -- -- -- --
101.62 0.47 9 -- -- 2.49 -- -- -0.109 -- 12.24 120 7.33 15.3
392.04 0.924 8.97 -- -- -- -- -- -0.0261 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.37 temperature 10.0 270 > th dose dependent rect. 6 19
13 67.58 temperature 10.0 10 > th dose dependent rect. 8 19
29 68.88 temperature 30.0 90 < th dose dependent rect. 3 18
31 69.08 temperature 30.0 90 < th dose dependent rect. 3 16
71 72.12 temperature 15.0 10 > th dose dependent rect. 8 16
89 72.81 temperature 30.0 10 < th dose dependent rect. 4 17
114 73.38 temperature 30.0 10 < th dose dependent rect. 4 14
167 74.38 temperature 30.0 270 < th dose independent rect. 1 17
189 75.08 wind 7.0 270 < th dose independent rect. 5 22
223 75.82 temperature 30.0 10 < th dose dependent rect. 4 12
252 76.30 temperature 10.0 270 > th dose dependent rect. 21 14
259 76.45 temperature 30.0 270 < th dose independent rect. 11 19
283 76.90 temperature 30.0 10 < th dose dependent sin 1 NA
288 77.00 temperature 30.0 270 < th dose independent rect. 13 17
294 77.11 temperature 30.0 270 < th dose independent rect. 15 15
302 77.20 temperature 30.0 270 < th dose independent rect. 10 21
329 77.59 radiation 30.0 270 < th dose dependent rect. 15 15
371 78.13 wind 7.0 90 < th dose independent rect. 8 19
375 78.16 temperature 30.0 270 < th dose independent rect. 11 9
384 78.24 radiation 1.0 270 < th dose dependent rect. 2 16
388 78.29 radiation 1.0 270 < th dose independent rect. 2 16
390 78.32 temperature 25.0 270 > th dose dependent sin 9 NA
404 78.48 temperature 30.0 90 < th dose dependent rect. 3 5
411 78.59 temperature 10.0 90 > th dose dependent sin 3 NA
412 78.59 temperature 30.0 270 < th dose dependent rect. 3 2
431 78.82 temperature 10.0 10 > th dose dependent sin 2 NA
457 79.06 radiation 1.0 270 < th dose dependent sin 2 NA
460 79.08 temperature 15.0 270 > th dose dependent rect. 7 3
463 79.12 wind 7.0 270 < th dose independent rect. 6 11
464 79.12 temperature 15.0 270 > th dose dependent rect. 6 5
474 79.18 radiation 10.0 270 < th dose dependent rect. 2 12
486 79.28 wind 5.0 270 < th dose independent rect. 3 2
490 79.30 temperature 10.0 270 > th dose dependent rect. 6 9
498 79.38 radiation 20.0 270 < th dose independent rect. 15 15
514 79.53 wind 1.0 270 > th dose independent rect. 2 3
516 79.53 temperature 30.0 10 < th dose dependent rect. 24 22
520 79.57 radiation 1.0 270 > th dose independent sin 2 NA
568 79.83 precipitation 0.1 270 < th dose independent rect. 5 22
569 79.83 precipitation 0.1 270 < th dose dependent rect. 5 22
599 79.97 temperature 25.0 270 > th dose dependent rect. 18 17
610 80.02 temperature 30.0 90 < th dose dependent rect. 11 21
612 80.03 wind 5.0 270 < th dose independent rect. 2 4
617 80.04 temperature 25.0 270 > th dose dependent rect. 17 19
618 80.05 radiation 1.0 270 < th dose dependent rect. 3 2
629 80.10 radiation 1.0 270 < th dose independent sin 3 NA
642 80.15 radiation 1.0 270 > th dose independent rect. 17 22
654 80.18 radiation 1.0 270 < th dose independent rect. 2 10
661 80.19 temperature 10.0 270 > th dose independent rect. 3 2
663 80.19 temperature 30.0 270 < th dose independent rect. 3 2
664 80.19 humidity 50.0 270 > th dose independent rect. 3 2
667 80.19 atmosphere 995.0 270 > th dose independent rect. 3 2
668 80.19 atmosphere 1010.0 270 < th dose independent rect. 3 2
670 80.19 radiation 20.0 270 < th dose independent rect. 3 2
673 80.19 temperature 10.0 270 > th dose independent rect. 5 22
676 80.20 radiation 30.0 270 < th dose dependent rect. 3 2
699 80.26 radiation 1.0 270 < th dose independent rect. 3 2
702 80.26 temperature 25.0 90 > th dose dependent sin 5 NA
712 80.30 temperature 20.0 10 > th dose dependent rect. 8 12
723 80.36 humidity 50.0 270 > th dose independent rect. 15 15
729 80.38 precipitation 0.1 90 < th dose independent rect. 8 19
730 80.38 precipitation 0.1 90 < th dose dependent rect. 8 19
731 80.40 precipitation 0.1 270 < th dose independent rect. 3 2
733 80.40 precipitation 0.1 270 < th dose dependent rect. 3 2
769 80.50 precipitation 0.1 270 < th dose independent rect. 6 20
770 80.50 precipitation 0.1 270 < th dose dependent rect. 6 20
835 80.71 radiation 1.0 270 < th dose independent rect. 2 4
884 80.88 radiation 40.0 90 < th dose dependent rect. 3 12
888 80.90 temperature 30.0 10 < th dose dependent rect. 4 4
910 81.00 radiation 20.0 90 < th dose independent rect. 3 5
962 81.18 temperature 10.0 270 > th dose independent rect. 2 4
964 81.18 temperature 30.0 270 < th dose independent rect. 2 4
965 81.18 humidity 50.0 270 > th dose independent rect. 2 4
968 81.18 atmosphere 995.0 270 > th dose independent rect. 2 4
969 81.18 atmosphere 1010.0 270 < th dose independent rect. 2 4
975 81.18 temperature 10.0 270 > th dose independent rect. 6 20
977 81.19 precipitation 0.1 270 < th dose independent rect. 2 4
980 81.19 atmosphere 995.0 270 > th dose dependent rect. 3 2
982 81.19 precipitation 0.1 270 < th dose dependent rect. 2 4