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Os01g0767600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0289) R2 : 0.917
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.06 (0.0749) R2dC : 0.0372 R2C : 0.0605
β3 : -4.16 (0.0617) R2dE : 0.836 R2E : 0.864
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.448 (0.0607) R2dN8 : 0.0129 R2N8 : 0.0174
σ : 0.541
deviance : 135.05
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C
peak time of C : 7.33
E
wheather : radiation
threshold : 0.792
memory length : 84
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 4.34
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
121.27 0.517 11 0.408 1.09 -4.17 0.571 -1.27 0.491 7.31 0.9016 85 4.34 --
126.94 0.525 11 0.421 1.12 -4.02 1.24 -- 0.507 8.15 0.8701 81 4.15 --
122.09 0.515 11 0.416 1.08 -4.15 -- -1.34 0.493 7.37 0.8659 85 4.36 --
130.48 0.532 11 0.421 1.08 -4.09 -- -- 0.506 7.65 0.8761 81 4.25 --
147.18 0.565 11 0.407 -- -4.21 -- -1.28 0.535 -- 1.215 70 5.31 --
290.65 0.799 10.9 0.426 4.53 -- 1.49 -- 0.722 12.4 -- -- -- --
300.17 0.811 10.9 0.484 4.53 -- -- -- 0.729 12.4 -- -- -- --
155.3 0.58 11 0.388 -- -4.21 -- -- 0.535 -- 1.09 70 5.28 --
135.05 0.541 11 -- 1.06 -4.16 -- -- 0.448 7.33 0.792 84 4.34 --
1588.46 1.86 11 0.331 -- -- -- -- 0.657 -- -- -- -- --
306.34 0.819 10.9 -- 4.52 -- -- -- 0.675 12.4 -- -- -- --
159.3 0.588 11 -- -- -4.21 -- -- 0.496 -- 1.07 69 5.28 --
1591.36 1.86 11 -- -- -- -- -- 0.62 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 123.42 radiation 1.0 90 < th dose dependent sin 10 NA
3 131.25 radiation 1.0 90 < th dose independent sin 11 NA
4 131.44 radiation 1.0 90 > th dose independent sin 11 NA
8 140.55 temperature 10.0 90 > th dose dependent rect. 19 10
16 145.41 radiation 1.0 90 < th dose dependent rect. 19 12
18 145.88 radiation 1.0 90 < th dose dependent rect. 19 22
21 146.60 radiation 1.0 90 < th dose dependent rect. 19 20
23 146.72 radiation 1.0 90 < th dose dependent rect. 19 18
25 147.34 radiation 1.0 90 < th dose dependent rect. 19 16
39 151.38 precipitation 0.1 90 < th dose independent rect. 5 14
40 151.38 precipitation 0.1 90 < th dose dependent rect. 5 14
45 152.49 temperature 10.0 270 > th dose dependent rect. 5 1
48 152.84 radiation 1.0 90 > th dose independent rect. 17 16
49 153.36 wind 7.0 90 < th dose independent rect. 19 10
55 153.70 radiation 1.0 90 < th dose independent rect. 19 10
57 153.71 temperature 10.0 90 > th dose independent rect. 19 10
58 153.71 temperature 30.0 90 < th dose independent rect. 19 10
59 153.71 humidity 50.0 90 > th dose independent rect. 19 10
61 153.71 atmosphere 995.0 90 > th dose independent rect. 19 10
65 153.71 temperature 10.0 90 > th dose independent rect. 5 14
66 153.71 atmosphere 1015.0 90 < th dose independent rect. 5 14
68 153.88 wind 9.0 90 < th dose independent rect. 5 14
72 154.61 radiation 1.0 90 < th dose independent rect. 19 12
73 154.84 temperature 20.0 30 > th dose independent rect. 20 9
75 155.05 temperature 10.0 270 > th dose dependent rect. 4 3
80 155.68 humidity 50.0 90 > th dose dependent rect. 19 10
83 156.18 wind 9.0 90 < th dose dependent rect. 5 4
95 158.05 radiation 1.0 90 > th dose independent rect. 4 5
108 158.66 precipitation 0.1 270 < th dose independent rect. 4 3
109 158.66 precipitation 0.1 270 < th dose dependent rect. 4 3
114 159.15 radiation 20.0 270 < th dose independent rect. 4 3
115 159.23 wind 5.0 270 < th dose independent rect. 4 3
116 159.35 radiation 10.0 270 < th dose independent rect. 5 1
119 159.49 humidity 70.0 270 > th dose independent rect. 4 3
122 159.62 temperature 10.0 90 > th dose independent rect. 5 4
124 159.62 humidity 50.0 90 > th dose independent rect. 5 4
125 159.62 atmosphere 995.0 90 > th dose independent rect. 5 4
126 159.62 atmosphere 1015.0 90 < th dose independent rect. 5 4
127 159.62 temperature 10.0 90 > th dose independent rect. 9 20
134 159.79 temperature 30.0 270 < th dose independent rect. 4 3
140 159.79 temperature 10.0 270 > th dose independent rect. 7 21
142 159.85 wind 9.0 270 < th dose dependent rect. 5 1
144 160.01 wind 5.0 270 < th dose independent rect. 5 1
145 160.11 wind 9.0 270 < th dose independent rect. 7 21
147 160.32 precipitation 0.1 270 < th dose independent rect. 5 1
148 160.32 precipitation 0.1 270 < th dose dependent rect. 5 1
160 161.13 temperature 10.0 270 > th dose independent rect. 5 1
162 161.13 temperature 30.0 270 < th dose independent rect. 5 1
163 161.13 humidity 50.0 270 > th dose independent rect. 5 1
166 161.13 atmosphere 995.0 270 > th dose independent rect. 5 1
167 161.13 atmosphere 1015.0 270 < th dose independent rect. 5 1
171 161.13 temperature 10.0 270 > th dose independent rect. 6 23
173 161.28 wind 9.0 90 < th dose independent rect. 9 20
175 161.34 wind 9.0 90 < th dose dependent rect. 19 10
176 161.45 radiation 1.0 90 < th dose independent rect. 19 20
177 161.49 radiation 1.0 90 < th dose independent rect. 19 22
178 161.77 radiation 1.0 90 < th dose independent rect. 19 18
194 162.43 radiation 1.0 90 < th dose independent rect. 19 16
202 162.72 precipitation 0.1 90 < th dose independent rect. 19 10
203 162.72 precipitation 0.1 90 < th dose dependent rect. 19 10
206 162.80 radiation 40.0 270 < th dose dependent rect. 5 1
207 162.96 radiation 40.0 270 < th dose dependent rect. 4 3
208 162.97 humidity 50.0 270 > th dose dependent rect. 4 3
211 163.50 radiation 1.0 270 > th dose independent rect. 4 2
221 163.52 humidity 50.0 270 > th dose dependent rect. 5 1
254 166.26 wind 9.0 30 < th dose dependent rect. 5 6
256 166.59 atmosphere 1015.0 90 < th dose independent rect. 9 20
260 166.85 atmosphere 995.0 90 > th dose independent rect. 9 20
282 167.91 precipitation 0.1 270 < th dose independent rect. 3 5
283 167.91 precipitation 0.1 270 < th dose dependent rect. 3 5
284 167.99 wind 9.0 270 < th dose independent rect. 6 23
291 168.70 precipitation 0.1 270 < th dose independent rect. 7 21
292 168.70 precipitation 0.1 270 < th dose dependent rect. 7 21
301 169.34 radiation 40.0 30 < th dose independent rect. 5 6
305 169.56 temperature 20.0 30 > th dose independent rect. 10 19
329 170.14 wind 7.0 270 < th dose independent rect. 3 5
350 170.65 humidity 70.0 270 > th dose independent rect. 3 5
357 170.73 temperature 10.0 270 > th dose independent rect. 3 5
359 170.73 temperature 30.0 270 < th dose independent rect. 3 5
360 170.73 humidity 50.0 270 > th dose independent rect. 3 5
362 170.73 atmosphere 995.0 270 > th dose independent rect. 3 5
363 170.73 atmosphere 1015.0 270 < th dose independent rect. 3 5
368 170.87 wind 5.0 10 < th dose independent rect. 5 5
374 170.99 atmosphere 995.0 90 > th dose independent rect. 5 14
401 171.24 atmosphere 1015.0 90 < th dose independent rect. 19 10
440 171.88 precipitation 0.1 90 < th dose independent rect. 9 20
443 171.88 precipitation 0.1 90 < th dose dependent rect. 9 20
592 173.88 wind 9.0 30 < th dose independent rect. 11 18
626 174.26 temperature 30.0 30 < th dose independent rect. 5 6
691 175.57 atmosphere 1015.0 270 < th dose independent rect. 7 21
964 179.16 atmosphere 995.0 270 > th dose independent rect. 7 21
968 179.18 temperature 10.0 270 > th dose independent rect. 13 10
969 179.18 temperature 10.0 270 > th dose independent rect. 23 14
970 179.18 atmosphere 995.0 270 > th dose independent rect. 23 14