Os01g0766200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0766200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Zinc finger, RING-type domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.75 | 0.335 | 11.8 | 1.07 | 1.01 | -0.693 | 0.212 | 0.461 | 0.00442 | 5.94 | 7.1 | 10 | -- | -- |
| 52.03 | 0.336 | 11.8 | 1.06 | 1.01 | -0.701 | 0.151 | -- | 0.00486 | 5.89 | 7.1 | 10 | -- | -- |
| 50.86 | 0.332 | 11.8 | 1.07 | 1.01 | -0.694 | -- | 0.45 | 0.00408 | 5.93 | 7.091 | 10 | -- | -- |
| 52.07 | 0.336 | 11.8 | 1.06 | 1.01 | -0.677 | -- | -- | 0.00469 | 6 | 7.095 | 10 | -- | -- |
| 102 | 0.473 | 11.8 | 1.09 | -- | -0.726 | -- | 0.406 | 0.0359 | -- | 6.29 | 8 | -- | -- |
| 59.42 | 0.361 | 11.8 | 1.08 | 1.33 | -- | -0.355 | -- | 0.0438 | 8.42 | -- | -- | -- | -- |
| 59.82 | 0.362 | 11.8 | 1.07 | 1.33 | -- | -- | -- | 0.0437 | 8.4 | -- | -- | -- | -- |
| 103.04 | 0.475 | 11.8 | 1.08 | -- | -0.728 | -- | -- | 0.0358 | -- | 6.235 | 7 | -- | -- |
| 81.65 | 0.421 | 11.8 | -- | 1.08 | -0.675 | -- | -- | -0.0853 | 5.84 | 3.376 | 29 | -- | -- |
| 157.89 | 0.587 | 11.8 | 1.07 | -- | -- | -- | -- | 0.0573 | -- | -- | -- | -- | -- |
| 89.75 | 0.443 | 11.8 | -- | 1.33 | -- | -- | -- | -0.075 | 8.34 | -- | -- | -- | -- |
| 133.73 | 0.54 | 11.8 | -- | -- | -0.723 | -- | -- | -0.0882 | -- | 5.736 | 6 | -- | -- |
| 188.25 | 0.64 | 11.8 | -- | -- | -- | -- | -- | -0.0617 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.47 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 4 | 49.05 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 4 |
| 7 | 49.47 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 9 | 49.55 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 16 | 49.72 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 16 |
| 17 | 49.72 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 16 |
| 18 | 49.73 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 16 |
| 19 | 49.73 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 20 |
| 20 | 49.74 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 21 | 49.74 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 11 |
| 23 | 49.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 16 |
| 46 | 49.87 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 58 | 49.92 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 1 | NA |
| 60 | 49.93 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 62 | 49.93 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 6 |
| 64 | 49.94 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 65 | 49.94 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 126 | 50.06 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 132 | 50.06 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 133 | 50.07 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 163 | 50.13 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 2 | 22 |
| 165 | 50.13 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 11 |
| 186 | 50.16 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 214 | 50.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 236 | 50.26 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 239 | 50.26 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 21 |
| 240 | 50.26 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 244 | 50.26 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 21 |
| 262 | 50.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 274 | 50.31 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 4 | 3 |
| 289 | 50.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 290 | 50.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 292 | 50.32 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 298 | 50.32 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 19 |
| 303 | 50.33 | humidity | 80.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 306 | 50.33 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 309 | 50.33 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 17 |
| 322 | 50.34 | precipitation | 0.1 | 43200 | > th | dose dependent | no | NA | NA |
| 323 | 50.34 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 329 | 50.35 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 1 | NA |
| 330 | 50.35 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 1 | NA |
| 341 | 50.35 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 1 | NA |
| 344 | 50.35 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 11 |
| 361 | 50.36 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 19 |
| 385 | 50.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 456 | 50.41 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 505 | 50.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 23 |
| 543 | 50.46 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 545 | 50.46 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 547 | 50.46 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 559 | 50.47 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 563 | 50.47 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 19 |
| 564 | 50.47 | wind | 9.0 | 720 | < th | dose independent | rect. | 7 | 21 |
| 576 | 50.48 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 583 | 50.48 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 19 | 6 |
| 638 | 50.51 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 644 | 50.51 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 653 | 50.52 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 720 | 50.55 | humidity | 80.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 730 | 50.55 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 11 | 21 |
| 734 | 50.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 736 | 50.55 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 740 | 50.55 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 749 | 50.55 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 23 |
| 762 | 50.56 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 774 | 50.57 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 877 | 50.61 | wind | 9.0 | 720 | < th | dose independent | rect. | 7 | 12 |
| 900 | 50.62 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 908 | 50.62 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 946 | 50.64 | precipitation | 0.1 | 43200 | > th | dose independent | no | NA | NA |
| 947 | 50.64 | precipitation | 0.1 | 43200 | < th | dose independent | no | NA | NA |
| 950 | 50.64 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 958 | 50.64 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 11 | NA |
| 959 | 50.64 | precipitation | 0.1 | 43200 | < th | dose dependent | no | NA | NA |
| 971 | 50.64 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 19 |
| 973 | 50.64 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 20 |
| 993 | 50.65 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |