BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0766200 Os01g0766200|AK069471
(224 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19310.1 | chr1:6676424-6677104 REVERSE LENGTH=227 174 3e-44
AT2G23780.1 | chr2:10123551-10124234 REVERSE LENGTH=228 167 6e-42
AT1G74990.1 | chr1:28159837-28160250 REVERSE LENGTH=138 137 5e-33
AT4G27470.1 | chr4:13735576-13736307 FORWARD LENGTH=244 113 9e-26
AT4G28270.1 | chr4:14007614-14008195 REVERSE LENGTH=194 103 1e-22
AT4G03510.1 | chr4:1557905-1558654 REVERSE LENGTH=250 102 1e-22
AT2G42030.1 | chr2:17539069-17540346 REVERSE LENGTH=426 100 5e-22
AT3G58030.1 | chr3:21485527-21486837 FORWARD LENGTH=437 96 2e-20
AT2G44410.1 | chr2:18328873-18330114 FORWARD LENGTH=414 90 1e-18
AT2G26350.1 | chr2:11217767-11220415 REVERSE LENGTH=382 58 5e-09
AT2G32950.1 | chr2:13978000-13983282 FORWARD LENGTH=676 52 3e-07
AT1G18660.4 | chr1:6421433-6425489 FORWARD LENGTH=492 50 9e-07
AT5G43530.1 | chr5:17489327-17494830 FORWARD LENGTH=1278 49 3e-06
AT3G26730.1 | chr3:9823770-9827270 FORWARD LENGTH=773 48 5e-06
AT3G20010.1 | chr3:6971352-6976340 FORWARD LENGTH=1048 47 8e-06
>AT1G19310.1 | chr1:6676424-6677104 REVERSE LENGTH=227
Length = 226
Score = 174 bits (441), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 106/139 (76%), Gaps = 2/139 (1%)
Query: 25 FECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCKAGLEEEKLVPLYGRGK 84
FECNICL+LAQDP+VTLCGHLFCWPCLY+WLH+H+ S++CPVCKA +EE++LVPLYGRGK
Sbjct: 21 FECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEEDRLVPLYGRGK 80
Query: 85 ASTDPRSRSVAGVQIPSRPAGQRPATASQXXXXX-XXXXXXXXWFMGGAGAPVAGGRWGN 143
+S DPRS+S+ G+++P+RP+GQRP TA FMGG AP+A R+GN
Sbjct: 81 SSADPRSKSIPGLEVPNRPSGQRPETAQPPDPNHGFAHHHGFGGFMGGFAAPMASARFGN 140
Query: 144 YTFSAAIGGLFPLLSFQVH 162
T SAA GGL P L F +H
Sbjct: 141 VTLSAAFGGLIPSL-FNLH 158
>AT2G23780.1 | chr2:10123551-10124234 REVERSE LENGTH=228
Length = 227
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/143 (58%), Positives = 98/143 (68%), Gaps = 5/143 (3%)
Query: 23 GSFECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCKAGLEEEKLVPLYGR 82
G FECNIC ELAQDP+VTLCGHLFCWPCLY WLH H+HS+ECPVCKA ++++KLVPLYGR
Sbjct: 24 GDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQDDKLVPLYGR 83
Query: 83 GKASTDPRSRSVAGVQIPSRPAGQRPATASQXXXXXXXXXXXXX--WFMGGAGAPVAGGR 140
GK TDPRS+ G++IP+RP GQRP TA+ MGG +A R
Sbjct: 84 GKNQTDPRSKRYPGLRIPNRPTGQRPETAAPPPQPEAASNFFNYGIGLMGGIMPMMATTR 143
Query: 141 WGNYTFSAAIGGLFP-LLSFQVH 162
+GN FS GGL P L +FQ H
Sbjct: 144 FGN--FSMGFGGLLPSLFNFQFH 164
>AT1G74990.1 | chr1:28159837-28160250 REVERSE LENGTH=138
Length = 137
Score = 137 bits (345), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 73/90 (81%)
Query: 22 SGSFECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCKAGLEEEKLVPLYG 81
S +F CNICLELA++P+VTLCGHLFCWPCLY+WLH H+ S CPVCKA ++E+ LVPLYG
Sbjct: 14 SNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKALVKEDTLVPLYG 73
Query: 82 RGKASTDPRSRSVAGVQIPSRPAGQRPATA 111
GK S+DPRS+ +GV +P+RPA R TA
Sbjct: 74 MGKPSSDPRSKLNSGVTVPNRPAATRTETA 103
>AT4G27470.1 | chr4:13735576-13736307 FORWARD LENGTH=244
Length = 243
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 62/105 (59%), Gaps = 11/105 (10%)
Query: 11 TAVDGGGGAKDSGSFECNICLELAQDPVVTLCGHLFCWPCLYEWLHVH-------AHSRE 63
T G A +SG F+CNICL+ A DPVVTLCGHLFCWPC+Y+WLHV H
Sbjct: 28 TTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNN 87
Query: 64 CPVCKAGLEEEKLVPLYGRGKASTD----PRSRSVAGVQIPSRPA 104
CPVCK+ + LVPLYGRG +S + + IP RPA
Sbjct: 88 CPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPA 132
>AT4G28270.1 | chr4:14007614-14008195 REVERSE LENGTH=194
Length = 193
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 69/118 (58%), Gaps = 25/118 (21%)
Query: 1 MENRVGESSATAVDGGGGAKDSGSFECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAH 60
ME E T VD GG F+CNICL+ +DPVVTLCGHLFCWPC+++W + +
Sbjct: 1 MEIEKDEDDTTLVDSGG------DFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNN 54
Query: 61 SRE-------------CPVCKAGLEEEKLVPLYGRGKASTDPRSRSVAGVQIPSRPAG 105
SR+ CPVCK+ + E LVP+YGRG+ + P+S G +PSRP G
Sbjct: 55 SRQRVDQYDHKREPPKCPVCKSDVSEATLVPIYGRGQKA--PQS----GSNVPSRPTG 106
>AT4G03510.1 | chr4:1557905-1558654 REVERSE LENGTH=250
Length = 249
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 12/93 (12%)
Query: 21 DSGSFECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHS--------RECPVCKAGLE 72
D +F+CNICL+ Q+PVVTLCGHLFCWPC+++WL V + S R+CPVCK+ +
Sbjct: 42 DDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVS 101
Query: 73 EEKLVPLYGRGKASTDPRSRSVAGVQIPSRPAG 105
LVPLYGRG+ +T ++ +P RP G
Sbjct: 102 HSTLVPLYGRGRCTTQEEGKN----SVPKRPVG 130
>AT2G42030.1 | chr2:17539069-17540346 REVERSE LENGTH=426
Length = 425
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 21 DSGSFECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCKAGLEEEKLVPLY 80
D F+C ICL+L++DPVVT CGHL+CW CLY+WL V + ++ECPVCK + + + P+Y
Sbjct: 135 DGSFFDCYICLDLSKDPVVTNCGHLYCWSCLYQWLQV-SEAKECPVCKGEVSVKTVTPIY 193
Query: 81 GRGKASTDPRSRSVAGVQIPSRPAGQR 107
GRG + S V+ +IPSRP +R
Sbjct: 194 GRGIQKRE--SEEVSNTKIPSRPQARR 218
>AT3G58030.1 | chr3:21485527-21486837 FORWARD LENGTH=437
Length = 436
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 13 VDGGGGAKDSGSFECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCKAGLE 72
V+ G+ D F+CNICL+L+++PV+T CGHL+CWPCLY+WL + + ++ECPVCK +
Sbjct: 126 VEKSSGS-DGNFFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQI-SDAKECPVCKGEVT 183
Query: 73 EEKLVPLYGRGKASTDPRSRSVAGVQIPSRPAGQR 107
+ + P+YGRG + ++P RP +R
Sbjct: 184 SKTVTPIYGRGNHKRE--IEESLDTKVPMRPHARR 216
>AT2G44410.1 | chr2:18328873-18330114 FORWARD LENGTH=414
Length = 413
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 23 GSFECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCKAGLEEEKLVPLYGR 82
G F+CNICLE A+DP++T CGHLFCW C Y+ ++ + +ECPVC + + +++P+YG
Sbjct: 121 GFFDCNICLEKAEDPILTCCGHLFCWGCFYQLPLIYLNIKECPVCDGEVTDAEVIPIYGN 180
Query: 83 GK--ASTDPRSRSVAGVQIPSRPAGQRPATASQ 113
G T P+ G+ +P RP +R + Q
Sbjct: 181 GDDCDGTKPKLED-CGISLPPRPNAKRVESVRQ 212
>AT2G26350.1 | chr2:11217767-11220415 REVERSE LENGTH=382
Length = 381
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 9 SATAVDGGGGAKDSGSFE----CNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSREC 64
++ A G DS S E C +CL Q P T CGH+FCW C+ EW + +EC
Sbjct: 305 TSEAEKGNWSTSDSTSTEAVGKCTLCLSTRQHPTATPCGHVFCWSCIMEWCN---EKQEC 361
Query: 65 PVCKAGLEEEKLVPLY 80
P+C+ LV LY
Sbjct: 362 PLCRTPNTHSSLVCLY 377
>AT2G32950.1 | chr2:13978000-13983282 FORWARD LENGTH=676
Length = 675
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 14 DGGGGAKDSGSFE------CNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVC 67
DGG G + G+ + C IC+++ +D +T CGH FC+ C+ L + +CP C
Sbjct: 33 DGGSGGSEIGAPDLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLR---NKSDCPCC 89
Query: 68 KAGLEEEKLVPLYGRGKASTDPRSRSVAGVQIP---SRPAGQRPATAS 112
L +L P + K +R V+ P R A QR S
Sbjct: 90 SQHLTNNQLYPNFLLDKLLKKTSARHVSKTASPLDQFREALQRGCDVS 137
>AT1G18660.4 | chr1:6421433-6425489 FORWARD LENGTH=492
Length = 491
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 17 GGAKDSGSFECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCKAGL 71
G A+ S F+C +CL+L +P T CGH FC CL++ + +CP+C+ +
Sbjct: 186 GMAERSDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMD---RGNKCPLCRTVI 237
>AT5G43530.1 | chr5:17489327-17494830 FORWARD LENGTH=1278
Length = 1277
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 20 KDSGSFECNICLELAQDPVVTLCGHLFCWPCLY-EWLHVHAHSRECPVCKAGLEEEKLV 77
+D S EC ICLE A DPV+T C H C CL W CP+C+ L+ +L+
Sbjct: 1033 RDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWR--SPSCGLCPICRTILKRTELI 1089
>AT3G26730.1 | chr3:9823770-9827270 FORWARD LENGTH=773
Length = 772
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 26 ECNICLELAQDPVVTLCGHLFCWPCLYEWL--HVHAHS----RECPVCKAGLEEEKLVPL 79
+C ICLE P +T CGH+FC+PC+ ++L V H + CP+C + +L +
Sbjct: 244 QCPICLEYPLCPQITSCGHIFCFPCILQYLLTGVDNHKVDCFKRCPLCFVMISPRELYTV 303
Query: 80 Y 80
Y
Sbjct: 304 Y 304
>AT3G20010.1 | chr3:6971352-6976340 FORWARD LENGTH=1048
Length = 1047
Score = 47.0 bits (110), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 21 DSGSFECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCKAGLEEE 74
+S S C C E + PVVTLCGH+FC+ C+ E++ ++ P CK L +
Sbjct: 745 ESSSAICYECNEPPEKPVVTLCGHIFCYECVLEYITGDENTCPVPRCKQQLARD 798
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.137 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,694,291
Number of extensions: 140329
Number of successful extensions: 761
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 792
Number of HSP's successfully gapped: 15
Length of query: 224
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 129
Effective length of database: 8,502,049
Effective search space: 1096764321
Effective search space used: 1096764321
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)