Os01g0764300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF155 family protein.
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Os01g0764300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF155 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.83 | 0.338 | 8.7 | -0.748 | 0.329 | -0.444 | -0.952 | -0.519 | -0.574 | 5.22 | 43.35 | 36 | -- | -- |
| 52.26 | 0.337 | 8.7 | -0.745 | 0.345 | -0.469 | -1.12 | -- | -0.583 | 4.33 | 35.01 | 32 | -- | -- |
| 53.75 | 0.341 | 8.7 | -0.744 | 0.349 | -0.454 | -- | -1.06 | -0.571 | 6.16 | 60.83 | 94 | -- | -- |
| 55.29 | 0.346 | 8.69 | -0.729 | 0.314 | -0.426 | -- | -- | -0.562 | 5.51 | 42.41 | 18 | -- | -- |
| 59.17 | 0.36 | 8.69 | -0.749 | -- | -0.355 | -- | -0.649 | -0.543 | -- | 45.5 | 41 | -- | -- |
| 57.86 | 0.357 | 8.69 | -0.725 | 0.395 | -- | 0.174 | -- | -0.547 | 9.08 | -- | -- | -- | -- |
| 57.92 | 0.356 | 8.69 | -0.72 | 0.398 | -- | -- | -- | -0.547 | 8.83 | -- | -- | -- | -- |
| 60.22 | 0.361 | 8.7 | -0.726 | -- | -0.367 | -- | -- | -0.556 | -- | 42.99 | 16 | -- | -- |
| 69.43 | 0.388 | 8.68 | -- | 0.297 | -0.384 | -- | -- | -0.488 | 6.2 | 46.92 | 18 | -- | -- |
| 66.95 | 0.382 | 8.7 | -0.72 | -- | -- | -- | -- | -0.544 | -- | -- | -- | -- | -- |
| 71.6 | 0.396 | 8.67 | -- | 0.397 | -- | -- | -- | -0.467 | 8.96 | -- | -- | -- | -- |
| 74 | 0.401 | 8.68 | -- | -- | -0.365 | -- | -- | -0.472 | -- | 43.4 | 18 | -- | -- |
| 80.62 | 0.419 | 8.68 | -- | -- | -- | -- | -- | -0.464 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.24 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 2 | 46.26 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 4 | 46.30 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 8 | 46.55 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 9 | 46.83 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 11 | 46.88 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 13 | 46.97 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 16 | 47.07 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 17 | 47.12 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 20 | 47.16 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 30 | 47.32 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 32 | 47.33 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 53 | 47.65 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 54 | 47.65 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 70 | 47.82 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 87 | 47.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 91 | 47.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 99 | 48.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 107 | 48.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 111 | 48.09 | wind | 1.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 116 | 48.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 117 | 48.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 118 | 48.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 121 | 48.15 | wind | 1.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 124 | 48.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 131 | 48.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 132 | 48.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 134 | 48.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 136 | 48.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 140 | 48.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 141 | 48.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 147 | 48.26 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 148 | 48.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 153 | 48.27 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 156 | 48.28 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 160 | 48.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 161 | 48.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 162 | 48.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 163 | 48.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 171 | 48.35 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 11 |
| 174 | 48.36 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 180 | 48.40 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 188 | 48.43 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 201 | 48.48 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 222 | 48.54 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 279 | 48.68 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 291 | 48.72 | wind | 1.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 295 | 48.73 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 310 | 48.78 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 325 | 48.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 352 | 48.87 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 442 | 49.03 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 470 | 49.07 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 12 |
| 509 | 49.13 | humidity | 80.0 | 720 | < th | dose independent | rect. | 9 | 4 |
| 537 | 49.17 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 611 | 49.28 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 640 | 49.33 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 679 | 49.38 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 19 |
| 817 | 49.55 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 835 | 49.57 | temperature | 30.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 868 | 49.60 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 15 |
| 930 | 49.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 934 | 49.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 939 | 49.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 942 | 49.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 954 | 49.71 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |