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Os01g0759700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : HCNGP-like family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.69 (0.0156) R2 : 0.00669
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0575 (0.0328) R2dN8 : 0.00864 R2N8 : 0.00669
σ : 0.294
deviance : 39.56
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.1 0.17 9.68 0.166 0.616 0.311 0.359 -0.543 0.0164 13.9 83.35 520 -- --
13.81 0.173 9.68 0.139 0.622 0.333 0.358 -- 0.0182 14 83.5 528 -- --
13.5 0.171 9.68 0.18 0.631 0.261 -- -0.561 0.00188 13.7 83 434 -- --
14.32 0.176 9.68 0.138 0.613 0.281 -- -- 0.00831 13.8 83 528 -- --
27.29 0.243 9.67 0.118 -- 0.73 -- -0.271 0.0514 -- 79.27 992 -- --
15.52 0.185 9.68 0.157 0.612 -- 0.234 -- -0.0313 12.9 -- -- -- --
15.75 0.186 9.68 0.165 0.611 -- -- -- -0.0302 12.9 -- -- -- --
27.49 0.244 9.67 0.0871 -- 0.75 -- -- 0.043 -- 79.22 994 -- --
14.79 0.179 9.68 -- 0.623 0.311 -- -- 0.00162 13.9 83.01 518 -- --
39.03 0.292 9.69 0.143 -- -- -- -- -0.0417 -- -- -- -- --
16.47 0.19 9.68 -- 0.608 -- -- -- -0.0487 12.9 -- -- -- --
27.68 0.245 9.67 -- -- 0.762 -- -- 0.0321 -- 78.35 998 -- --
39.56 0.294 9.69 -- -- -- -- -- -0.0575 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.49 temperature 30.0 90 < th dose independent rect. 9 20
2 11.50 temperature 15.0 90 > th dose independent rect. 9 20
3 11.75 humidity 50.0 90 > th dose dependent rect. 5 4
4 11.76 temperature 10.0 720 > th dose dependent rect. 5 2
5 11.78 humidity 80.0 270 > th dose dependent rect. 5 1
6 11.79 temperature 30.0 90 < th dose independent rect. 11 18
9 11.83 wind 9.0 90 < th dose dependent rect. 5 4
10 11.84 atmosphere 995.0 90 > th dose independent rect. 9 20
11 11.85 wind 5.0 90 < th dose independent rect. 5 4
12 11.86 radiation 10.0 270 < th dose dependent rect. 5 1
14 11.86 humidity 50.0 90 > th dose dependent rect. 5 6
15 11.87 radiation 40.0 90 < th dose independent rect. 5 4
18 11.89 radiation 10.0 270 < th dose independent rect. 5 1
22 11.90 humidity 70.0 90 > th dose independent rect. 5 4
23 11.90 precipitation 0.1 90 < th dose independent rect. 9 20
24 11.90 temperature 10.0 90 > th dose dependent rect. 5 4
25 11.90 precipitation 0.1 90 < th dose dependent rect. 9 20
27 11.91 temperature 10.0 90 > th dose independent rect. 5 4
29 11.91 humidity 50.0 90 > th dose independent rect. 5 4
31 11.91 atmosphere 995.0 90 > th dose independent rect. 5 4
32 11.91 atmosphere 1015.0 90 < th dose independent rect. 5 4
33 11.91 precipitation 0.1 90 < th dose independent rect. 5 4
35 11.91 precipitation 0.1 270 < th dose independent rect. 6 23
36 11.91 temperature 10.0 720 > th dose dependent rect. 4 4
37 11.91 precipitation 0.1 90 < th dose dependent rect. 5 4
38 11.91 precipitation 0.1 270 < th dose dependent rect. 6 23
40 11.93 temperature 30.0 90 < th dose independent rect. 5 4
47 11.96 atmosphere 1015.0 90 < th dose dependent rect. 5 4
48 11.97 humidity 80.0 270 > th dose independent rect. 5 1
49 11.98 humidity 50.0 90 > th dose independent rect. 9 20
58 12.03 wind 9.0 90 < th dose independent rect. 9 20
62 12.06 atmosphere 1010.0 270 < th dose independent rect. 5 1
63 12.06 wind 9.0 270 < th dose dependent rect. 5 1
68 12.07 radiation 40.0 90 < th dose dependent rect. 5 4
73 12.09 wind 5.0 270 < th dose independent rect. 5 1
78 12.09 temperature 10.0 90 > th dose dependent rect. 5 21
80 12.10 atmosphere 1015.0 90 < th dose independent rect. 9 20
84 12.11 temperature 15.0 270 > th dose independent rect. 7 21
87 12.12 temperature 10.0 270 > th dose independent rect. 5 1
89 12.12 temperature 30.0 270 < th dose independent rect. 5 1
90 12.12 humidity 50.0 270 > th dose independent rect. 5 1
93 12.12 atmosphere 995.0 270 > th dose independent rect. 5 1
98 12.12 precipitation 0.1 270 < th dose independent rect. 5 1
99 12.12 temperature 10.0 270 > th dose independent rect. 6 23
100 12.12 precipitation 0.1 270 < th dose dependent rect. 5 1
102 12.14 temperature 10.0 1440 > th dose independent rect. 6 4
105 12.14 atmosphere 995.0 1440 > th dose independent rect. 6 4
106 12.14 atmosphere 1015.0 1440 < th dose independent rect. 6 4
107 12.14 temperature 30.0 90 < th dose independent rect. 17 12
108 12.14 temperature 10.0 1440 > th dose independent rect. 10 20
113 12.14 temperature 10.0 90 > th dose dependent rect. 5 14
120 12.16 atmosphere 1015.0 270 < th dose dependent rect. 5 1
125 12.18 humidity 50.0 4320 > th dose independent rect. 6 4
131 12.19 radiation 1.0 90 < th dose independent rect. 17 12
152 12.25 radiation 1.0 90 < th dose dependent rect. 17 12
154 12.26 wind 1.0 90 > th dose independent rect. 5 4
163 12.27 temperature 10.0 90 > th dose dependent rect. 5 18
188 12.31 humidity 70.0 90 > th dose independent rect. 17 12
190 12.31 atmosphere 1000.0 270 > th dose independent rect. 6 23
192 12.32 radiation 40.0 90 < th dose independent rect. 5 6
193 12.32 humidity 50.0 270 > th dose independent rect. 7 22
199 12.33 humidity 50.0 720 > th dose dependent rect. 19 5
204 12.35 atmosphere 1000.0 270 > th dose independent rect. 7 21
217 12.38 humidity 50.0 270 > th dose dependent rect. 19 13
238 12.40 precipitation 0.1 720 < th dose independent rect. 15 14
239 12.40 radiation 10.0 30 < th dose dependent sin 10 NA
244 12.40 precipitation 0.1 720 < th dose dependent rect. 15 14
272 12.44 radiation 40.0 90 < th dose dependent rect. 5 6
273 12.44 temperature 10.0 270 > th dose dependent rect. 3 21
274 12.45 radiation 1.0 90 < th dose independent sin 11 NA
276 12.45 atmosphere 1000.0 90 > th dose independent rect. 11 18
286 12.46 temperature 10.0 90 > th dose dependent rect. 5 16
297 12.47 temperature 15.0 90 > th dose independent rect. 19 10
301 12.47 wind 9.0 270 < th dose independent rect. 7 22
309 12.48 radiation 1.0 90 > th dose independent rect. 18 15
329 12.50 precipitation 0.1 720 < th dose independent rect. 7 14
334 12.50 precipitation 0.1 720 < th dose dependent rect. 7 14
384 12.55 temperature 10.0 1440 > th dose independent rect. 6 6
387 12.55 humidity 60.0 90 > th dose independent rect. 5 6
388 12.55 atmosphere 995.0 1440 > th dose independent rect. 6 6
389 12.55 precipitation 0.1 720 < th dose independent rect. 9 10
390 12.55 temperature 10.0 1440 > th dose independent rect. 12 18
399 12.55 precipitation 0.1 720 < th dose dependent rect. 9 10
400 12.56 radiation 1.0 90 > th dose independent sin 10 NA
404 12.56 radiation 1.0 90 > th dose independent rect. 4 5
418 12.56 humidity 50.0 10 > th dose dependent rect. 6 3
426 12.57 precipitation 0.1 720 < th dose independent rect. 17 11
434 12.57 radiation 1.0 720 < th dose dependent rect. 16 8
435 12.57 precipitation 0.1 720 < th dose dependent rect. 17 11
444 12.58 humidity 50.0 90 > th dose independent rect. 11 18
458 12.59 temperature 30.0 90 < th dose independent rect. 13 16
464 12.59 humidity 50.0 90 > th dose dependent rect. 5 8
471 12.60 wind 1.0 90 > th dose independent rect. 9 20
483 12.61 temperature 30.0 270 < th dose independent rect. 8 9
484 12.61 precipitation 0.1 90 < th dose independent rect. 11 18
494 12.61 precipitation 0.1 90 < th dose dependent rect. 11 18
503 12.62 temperature 10.0 90 > th dose independent rect. 5 6
504 12.62 atmosphere 995.0 90 > th dose independent rect. 5 6
505 12.62 atmosphere 1015.0 90 < th dose independent rect. 5 6
526 12.63 precipitation 0.1 90 < th dose independent rect. 5 6
533 12.63 precipitation 0.1 90 < th dose dependent rect. 5 6
544 12.64 temperature 15.0 270 > th dose independent rect. 17 11
552 12.64 atmosphere 995.0 90 > th dose dependent rect. 5 4
554 12.64 humidity 50.0 720 > th dose dependent rect. 20 11
555 12.65 radiation 1.0 720 > th dose independent rect. 17 1
590 12.67 wind 1.0 270 > th dose independent rect. 5 1
593 12.67 precipitation 0.1 90 < th dose independent rect. 19 10
595 12.67 precipitation 0.1 720 < th dose independent rect. 1 18
603 12.67 precipitation 0.1 90 < th dose dependent rect. 19 10
605 12.67 precipitation 0.1 720 < th dose dependent rect. 1 18
628 12.69 wind 1.0 720 > th dose independent rect. 17 2
646 12.69 temperature 10.0 720 > th dose dependent rect. 17 2
658 12.70 radiation 1.0 10 > th dose independent rect. 18 15
659 12.70 wind 9.0 90 < th dose independent rect. 11 18
683 12.71 temperature 15.0 10 > th dose dependent rect. 6 16
701 12.72 radiation 40.0 10 < th dose dependent rect. 6 3
707 12.72 temperature 10.0 10 > th dose dependent rect. 6 14
731 12.73 atmosphere 1015.0 270 < th dose independent rect. 7 21
744 12.74 precipitation 0.1 720 < th dose independent rect. 17 2
752 12.74 wind 9.0 90 < th dose independent rect. 5 14
753 12.74 precipitation 0.1 90 < th dose independent rect. 5 14
757 12.74 precipitation 0.1 720 < th dose dependent rect. 17 2
768 12.74 precipitation 0.1 90 < th dose dependent rect. 5 14
791 12.75 temperature 10.0 90 > th dose dependent rect. 19 10
882 12.79 temperature 15.0 720 > th dose independent rect. 17 2
904 12.79 radiation 1.0 720 < th dose independent rect. 16 8
909 12.79 atmosphere 995.0 90 > th dose independent rect. 19 10
910 12.79 radiation 20.0 90 < th dose independent rect. 19 10
914 12.79 temperature 10.0 90 > th dose independent rect. 5 14
915 12.79 atmosphere 1015.0 90 < th dose independent rect. 5 14
937 12.79 humidity 90.0 270 > th dose dependent rect. 4 20
946 12.80 wind 9.0 90 < th dose independent rect. 19 10
953 12.80 humidity 70.0 90 > th dose independent rect. 13 16