Os01g0757600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0757600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 229.7 | 0.712 | 6.03 | -0.127 | 1.51 | -0.992 | 0.478 | 0.0594 | 0.0146 | 2.57 | 20.54 | 926 | -- | -- |
| 229.71 | 0.706 | 6.03 | -0.137 | 1.51 | -0.998 | 0.49 | -- | 0.0121 | 2.57 | 20.55 | 926 | -- | -- |
| 230.46 | 0.707 | 6.03 | -0.112 | 1.52 | -0.984 | -- | 0.188 | 0.0183 | 2.56 | 20.51 | 930 | -- | -- |
| 230.55 | 0.707 | 6.03 | -0.144 | 1.52 | -1.01 | -- | -- | 0.0127 | 2.54 | 20.53 | 929 | -- | -- |
| 335.83 | 0.854 | 6.05 | -0.242 | -- | -1.04 | -- | -0.554 | 0.0174 | -- | 20.49 | 201 | -- | -- |
| 256.65 | 0.751 | 6.08 | -0.523 | 1.43 | -- | 0.732 | -- | -0.211 | 2.87 | -- | -- | -- | -- |
| 258.46 | 0.753 | 6.08 | -0.54 | 1.43 | -- | -- | -- | -0.215 | 2.83 | -- | -- | -- | -- |
| 301.28 | 0.808 | 6.03 | -0.141 | -- | -0.924 | -- | -- | 0.0586 | -- | 25.8 | 105 | -- | -- |
| 231.03 | 0.708 | 6.03 | -- | 1.52 | -1.06 | -- | -- | 0.0373 | 2.53 | 20.51 | 932 | -- | -- |
| 376.15 | 0.906 | 6.07 | -0.479 | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
| 266.15 | 0.763 | 6.07 | -- | 1.42 | -- | -- | -- | -0.155 | 2.82 | -- | -- | -- | -- |
| 301.78 | 0.809 | 6 | -- | -- | -0.939 | -- | -- | 0.154 | -- | 25.9 | 99 | -- | -- |
| 382.22 | 0.913 | 6.06 | -- | -- | -- | -- | -- | -0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 214.99 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 4 | 218.42 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 6 | 219.51 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 12 |
| 17 | 220.50 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 20 |
| 25 | 221.18 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 2 |
| 29 | 221.54 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 45 | 222.68 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 13 |
| 48 | 222.85 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 5 |
| 54 | 223.09 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 69 | 223.59 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 73 | 223.76 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 18 |
| 79 | 223.92 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 90 | 224.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 13 |
| 91 | 224.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 13 |
| 93 | 224.38 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 7 |
| 106 | 224.65 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 110 | 224.78 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 2 | 18 |
| 111 | 224.78 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 2 | 18 |
| 119 | 224.97 | temperature | 20.0 | 720 | > th | dose independent | sin | 10 | NA |
| 125 | 225.04 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 21 |
| 175 | 226.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 181 | 226.22 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 5 |
| 185 | 226.25 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 186 | 226.25 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 7 |
| 193 | 226.32 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 20 | 7 |
| 209 | 226.55 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 3 |
| 212 | 226.57 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 215 | 226.63 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 3 |
| 217 | 226.63 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 218 | 226.64 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 226 | 226.73 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 231 | 226.79 | humidity | 90.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 238 | 226.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 241 | 227.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 243 | 227.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 246 | 227.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 22 |
| 247 | 227.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 251 | 227.11 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 257 | 227.13 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 17 |
| 258 | 227.13 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 264 | 227.17 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 268 | 227.23 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 280 | 227.37 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 281 | 227.37 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 286 | 227.50 | wind | 5.0 | 90 | < th | dose dependent | rect. | 2 | 4 |
| 300 | 227.60 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 13 |
| 304 | 227.63 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 13 |
| 312 | 227.65 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 17 |
| 313 | 227.65 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 334 | 227.84 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 8 | 21 |
| 335 | 227.84 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 8 | 21 |
| 340 | 227.92 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 351 | 227.98 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 20 | 7 |
| 370 | 228.07 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 384 | 228.21 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 403 | 228.34 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 422 | 228.43 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 18 | 10 |
| 423 | 228.43 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 18 | 10 |
| 429 | 228.46 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 5 |
| 438 | 228.50 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 440 | 228.50 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 23 |
| 441 | 228.50 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 445 | 228.53 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 13 |
| 446 | 228.54 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 451 | 228.55 | wind | 5.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 464 | 228.62 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 574 | 229.00 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 579 | 229.02 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 3 |
| 580 | 229.02 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 581 | 229.02 | wind | 3.0 | 90 | < th | dose dependent | rect. | 6 | 20 |
| 583 | 229.04 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 602 | 229.12 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 8 |
| 629 | 229.22 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 639 | 229.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 647 | 229.29 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 648 | 229.31 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 1 |
| 656 | 229.33 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 659 | 229.34 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 660 | 229.34 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 2 |
| 666 | 229.35 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 15 |
| 698 | 229.44 | humidity | 80.0 | 720 | < th | dose independent | rect. | 17 | 10 |
| 706 | 229.45 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 708 | 229.45 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 709 | 229.45 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 712 | 229.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 713 | 229.45 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 715 | 229.45 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 733 | 229.47 | humidity | 80.0 | 720 | > th | dose independent | rect. | 15 | 18 |
| 735 | 229.48 | temperature | 20.0 | 720 | < th | dose independent | rect. | 17 | 14 |
| 777 | 229.58 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 793 | 229.62 | humidity | 80.0 | 720 | < th | dose independent | rect. | 17 | 19 |
| 795 | 229.62 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 845 | 229.74 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 2 |
| 857 | 229.78 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 859 | 229.78 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 860 | 229.78 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 863 | 229.78 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 864 | 229.78 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 866 | 229.78 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 870 | 229.78 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 894 | 229.84 | temperature | 20.0 | 720 | < th | dose independent | sin | 11 | NA |
| 920 | 229.92 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 20 | 7 |
| 925 | 229.93 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 930 | 229.94 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 996 | 230.09 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |