Os01g0756400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0756400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.09 | 0.301 | 13.1 | 0.164 | 0.594 | -1.04 | -0.0165 | -0.285 | 0.346 | 2.97 | 25.64 | 221 | -- | -- |
| 41.18 | 0.299 | 13.1 | 0.119 | 0.595 | -1.02 | -0.0923 | -- | 0.335 | 2.98 | 25.72 | 220 | -- | -- |
| 41.09 | 0.299 | 13.1 | 0.166 | 0.597 | -1.04 | -- | -0.287 | 0.345 | 2.97 | 25.7 | 216 | -- | -- |
| 41.21 | 0.299 | 13.1 | 0.118 | 0.597 | -1.02 | -- | -- | 0.334 | 2.99 | 25.77 | 220 | -- | -- |
| 51.05 | 0.333 | 13.1 | 0.144 | -- | -1.03 | -- | -0.312 | 0.353 | -- | 25.4 | 1127 | -- | -- |
| 56.44 | 0.352 | 13 | 0.379 | 0.406 | -- | -0.118 | -- | 0.554 | 2.62 | -- | -- | -- | -- |
| 56.49 | 0.352 | 13 | 0.382 | 0.406 | -- | -- | -- | 0.554 | 2.64 | -- | -- | -- | -- |
| 51.18 | 0.333 | 13.1 | 0.0978 | -- | -0.997 | -- | -- | 0.347 | -- | 25.6 | 1119 | -- | -- |
| 41.55 | 0.3 | 13.1 | -- | 0.608 | -1.05 | -- | -- | 0.32 | 2.98 | 25.8 | 214 | -- | -- |
| 66.13 | 0.38 | 13 | 0.399 | -- | -- | -- | -- | 0.565 | -- | -- | -- | -- | -- |
| 60.34 | 0.363 | 13.1 | -- | 0.414 | -- | -- | -- | 0.512 | 2.66 | -- | -- | -- | -- |
| 51.46 | 0.334 | 13.1 | -- | -- | -1.01 | -- | -- | 0.345 | -- | 25.6 | 1114 | -- | -- |
| 70.34 | 0.391 | 13.1 | -- | -- | -- | -- | -- | 0.52 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.70 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 2 | 39.77 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 3 | 39.84 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 9 |
| 4 | 39.84 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 9 | 40.09 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 9 | 22 |
| 12 | 40.22 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 17 | 40.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 29 | 40.75 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 83 | 41.27 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 22 |
| 89 | 41.33 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 90 | 41.33 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 100 | 41.37 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 16 | 23 |
| 119 | 41.45 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 164 | 41.66 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 176 | 41.71 | temperature | 20.0 | 270 | > th | dose independent | rect. | 9 | 18 |
| 178 | 41.73 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 190 | 41.79 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 191 | 41.80 | temperature | 20.0 | 270 | > th | dose independent | rect. | 8 | 20 |
| 205 | 41.88 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 220 | 41.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 20 |
| 263 | 42.18 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 270 | 42.21 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 315 | 42.33 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 336 | 42.39 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 17 |
| 382 | 42.56 | temperature | 25.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 394 | 42.59 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 437 | 42.70 | temperature | 10.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 478 | 42.82 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 484 | 42.83 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 498 | 42.90 | temperature | 20.0 | 10 | > th | dose independent | rect. | 10 | 19 |
| 514 | 42.93 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 567 | 43.08 | temperature | 25.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 570 | 43.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 18 |
| 571 | 43.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 595 | 43.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 597 | 43.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 617 | 43.18 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 22 |
| 634 | 43.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 637 | 43.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 643 | 43.21 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 665 | 43.26 | temperature | 10.0 | 90 | > th | dose dependent | no | NA | NA |
| 742 | 43.42 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 820 | 43.58 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 973 | 43.82 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |