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Os01g0748900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Membrane attack complex component/perforin/complement C9 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.91 (0.0131) R2 : 0.00795
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0529 (0.0277) R2dN8 : 0.0103 R2N8 : 0.00795
σ : 0.247
deviance : 28.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.94 0.21 9.92 -0.0327 0.106 -0.278 0.331 0.067 0.0439 18.6 15.31 12 -- --
19.96 0.208 9.92 -0.0306 0.109 -0.287 0.3 -- 0.044 18 15.39 12 -- --
20.14 0.209 9.92 -0.0333 0.114 -0.304 -- 0.0222 0.0498 16.9 15.36 12 -- --
20.13 0.209 9.91 -0.0307 0.12 -0.314 -- -- 0.0453 16.6 15.36 12 -- --
20.82 0.213 9.92 -0.0322 -- -0.288 -- 0.0479 0.0439 -- 15.34 12 -- --
23.4 0.227 9.92 -0.0466 0.27 -- 0.217 -- 0.0468 22.5 -- -- -- --
23.59 0.227 9.92 -0.0556 0.269 -- -- -- 0.046 22.6 -- -- -- --
20.81 0.212 9.91 -0.0354 -- -0.285 -- -- 0.0454 -- 15.45 12 -- --
20.16 0.209 9.91 -- 0.121 -0.316 -- -- 0.0486 16.6 15.39 12 -- --
28.02 0.247 9.91 -0.0507 -- -- -- -- 0.0472 -- -- -- -- --
23.67 0.228 9.92 -- 0.268 -- -- -- 0.0522 22.6 -- -- -- --
20.85 0.213 9.91 -- -- -0.285 -- -- 0.0468 -- 15.43 12 -- --
28.09 0.247 9.91 -- -- -- -- -- 0.0529 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.08 temperature 10.0 270 > th dose dependent rect. 13 18
3 17.22 temperature 10.0 270 > th dose dependent rect. 12 20
6 17.35 temperature 20.0 270 > th dose independent rect. 13 18
7 17.44 temperature 10.0 90 > th dose dependent rect. 15 17
19 17.64 temperature 20.0 90 > th dose independent rect. 15 18
28 17.79 wind 1.0 270 > th dose independent rect. 13 5
29 17.79 humidity 50.0 270 > th dose independent rect. 17 9
32 17.82 radiation 1.0 270 > th dose independent rect. 7 6
33 17.82 radiation 20.0 270 < th dose dependent rect. 17 9
34 17.82 temperature 10.0 10 > th dose dependent rect. 15 18
45 17.89 precipitation 0.1 270 < th dose independent rect. 7 6
47 17.89 radiation 10.0 270 < th dose independent rect. 17 9
48 17.89 precipitation 0.1 270 < th dose dependent rect. 7 6
50 17.90 precipitation 0.1 270 < th dose independent rect. 17 9
51 17.90 precipitation 0.1 270 < th dose dependent rect. 17 9
53 17.91 temperature 10.0 270 > th dose independent rect. 7 6
54 17.91 atmosphere 995.0 270 > th dose independent rect. 7 6
55 17.91 atmosphere 1015.0 270 < th dose independent rect. 7 6
57 17.91 wind 9.0 270 < th dose independent rect. 13 18
58 17.91 temperature 10.0 270 > th dose independent rect. 13 18
61 17.92 wind 1.0 270 > th dose independent rect. 7 6
62 17.92 radiation 10.0 10 > th dose independent rect. 9 7
64 17.92 wind 9.0 270 < th dose independent rect. 2 15
67 17.93 wind 9.0 270 < th dose independent rect. 7 6
73 17.94 wind 9.0 270 < th dose independent rect. 17 9
77 17.97 temperature 10.0 270 > th dose independent rect. 17 9
81 17.97 temperature 10.0 270 > th dose independent rect. 2 15
82 17.97 atmosphere 1015.0 270 < th dose independent rect. 2 15
90 17.99 radiation 1.0 90 > th dose independent rect. 9 6
91 17.99 temperature 30.0 270 < th dose independent rect. 17 9
92 17.99 temperature 10.0 270 > th dose dependent rect. 24 8
97 18.02 wind 1.0 270 > th dose independent rect. 12 7
98 18.02 humidity 50.0 270 > th dose dependent rect. 23 9
101 18.04 atmosphere 995.0 90 > th dose independent rect. 9 6
106 18.06 wind 9.0 270 < th dose independent rect. 13 5
118 18.07 precipitation 0.1 270 < th dose independent rect. 18 19
120 18.07 precipitation 0.1 270 < th dose dependent rect. 18 19
122 18.08 temperature 10.0 270 > th dose independent rect. 13 5
124 18.08 atmosphere 1010.0 270 < th dose independent rect. 13 5
131 18.08 wind 9.0 270 < th dose independent rect. 18 19
132 18.08 temperature 10.0 270 > th dose independent rect. 18 19
145 18.10 precipitation 0.1 270 < th dose independent rect. 17 21
146 18.10 atmosphere 1015.0 270 < th dose dependent rect. 14 3
148 18.10 precipitation 0.1 270 < th dose dependent rect. 17 21
159 18.11 radiation 40.0 90 < th dose independent rect. 15 18
166 18.12 atmosphere 995.0 270 > th dose independent rect. 18 19
177 18.14 atmosphere 995.0 10 > th dose independent rect. 9 7
187 18.15 temperature 30.0 270 < th dose independent rect. 7 6
188 18.15 atmosphere 995.0 270 > th dose independent rect. 17 9
189 18.15 precipitation 0.1 270 < th dose independent rect. 2 15
195 18.15 precipitation 0.1 270 < th dose dependent rect. 2 15
203 18.17 temperature 30.0 270 < th dose independent rect. 18 19
204 18.17 temperature 10.0 270 > th dose dependent rect. 13 5
213 18.20 humidity 50.0 270 > th dose independent rect. 7 6
214 18.20 precipitation 0.1 90 < th dose independent rect. 9 6
218 18.20 precipitation 0.1 90 < th dose dependent rect. 9 6
222 18.21 temperature 30.0 270 < th dose independent rect. 8 17
228 18.22 temperature 10.0 90 > th dose independent rect. 9 6
229 18.22 atmosphere 1015.0 90 < th dose independent rect. 9 6
238 18.22 precipitation 0.1 270 < th dose independent rect. 13 18
239 18.22 temperature 10.0 270 > th dose dependent rect. 14 3
241 18.22 precipitation 0.1 270 < th dose dependent rect. 13 18
242 18.23 wind 9.0 270 < th dose independent rect. 14 3
245 18.24 wind 9.0 90 < th dose independent rect. 9 6
250 18.24 atmosphere 1015.0 270 < th dose dependent rect. 13 5
253 18.25 temperature 10.0 270 > th dose independent rect. 14 3
255 18.25 atmosphere 1010.0 270 < th dose independent rect. 14 3
260 18.25 temperature 10.0 270 > th dose independent rect. 17 21
265 18.27 precipitation 0.1 270 < th dose independent rect. 13 5
276 18.27 wind 9.0 270 < th dose independent rect. 17 21
277 18.27 precipitation 0.1 270 < th dose dependent rect. 13 5
290 18.30 humidity 80.0 270 > th dose independent rect. 1 6
302 18.31 precipitation 0.1 270 < th dose independent rect. 14 3
309 18.31 precipitation 0.1 270 < th dose dependent rect. 14 3
323 18.33 humidity 80.0 90 < th dose independent rect. 9 6
338 18.34 radiation 30.0 270 < th dose independent rect. 24 8
382 18.39 wind 1.0 270 > th dose independent rect. 18 19
408 18.41 humidity 80.0 90 < th dose independent rect. 22 17
409 18.41 atmosphere 995.0 270 > th dose independent rect. 17 21
420 18.42 precipitation 0.1 270 < th dose independent rect. 8 16
421 18.42 atmosphere 1015.0 270 < th dose independent rect. 13 18
422 18.42 humidity 50.0 270 > th dose independent rect. 18 19
428 18.42 precipitation 0.1 270 < th dose dependent rect. 8 16
449 18.45 wind 9.0 270 < th dose independent rect. 24 8
450 18.45 temperature 10.0 270 > th dose independent rect. 24 8
452 18.45 temperature 30.0 270 < th dose independent rect. 24 8
453 18.45 humidity 50.0 270 > th dose independent rect. 24 8
455 18.45 atmosphere 995.0 270 > th dose independent rect. 24 8
456 18.45 atmosphere 1015.0 270 < th dose independent rect. 24 8
457 18.45 temperature 10.0 270 > th dose independent rect. 8 16
459 18.45 radiation 1.0 270 > th dose independent rect. 13 17
485 18.46 humidity 50.0 270 > th dose independent rect. 19 17
503 18.47 radiation 40.0 270 < th dose dependent rect. 1 7
529 18.51 precipitation 0.1 270 < th dose independent rect. 24 8
535 18.51 precipitation 0.1 270 < th dose dependent rect. 24 8
546 18.52 wind 1.0 270 > th dose dependent rect. 13 5
573 18.54 wind 9.0 270 < th dose independent rect. 8 16
586 18.55 atmosphere 995.0 270 > th dose independent rect. 8 16
702 18.61 humidity 90.0 270 < th dose independent rect. 9 2
703 18.61 radiation 40.0 270 < th dose independent rect. 15 2
734 18.63 wind 1.0 90 > th dose dependent rect. 15 4
740 18.64 wind 1.0 270 > th dose independent rect. 18 8
743 18.64 atmosphere 1015.0 90 < th dose independent rect. 15 18
770 18.65 atmosphere 995.0 270 > th dose independent rect. 13 18
772 18.65 temperature 10.0 90 > th dose dependent rect. 9 6
800 18.68 radiation 1.0 270 > th dose independent rect. 14 3
802 18.68 radiation 40.0 90 < th dose independent rect. 15 4
806 18.68 radiation 40.0 90 < th dose independent rect. 13 7
835 18.71 humidity 90.0 270 < th dose independent rect. 14 3
837 18.71 temperature 10.0 10 > th dose independent rect. 9 7
839 18.71 atmosphere 1015.0 10 < th dose independent rect. 9 7
840 18.71 precipitation 0.1 10 < th dose independent rect. 9 7
844 18.71 temperature 10.0 10 > th dose independent rect. 16 17
850 18.71 precipitation 0.1 10 < th dose dependent rect. 9 7
855 18.72 wind 9.0 10 < th dose independent rect. 9 7
864 18.72 humidity 50.0 270 > th dose independent rect. 8 17
865 18.72 radiation 40.0 10 < th dose independent rect. 16 17
927 18.76 radiation 20.0 10 < th dose dependent sin 0 NA
929 18.76 wind 9.0 270 < th dose dependent rect. 7 6
948 18.77 wind 9.0 10 < th dose independent rect. 16 17
953 18.77 temperature 10.0 270 > th dose dependent rect. 8 4
961 18.78 humidity 80.0 90 < th dose independent rect. 5 10
968 18.78 wind 9.0 90 < th dose dependent rect. 9 6
971 18.79 wind 9.0 270 < th dose independent rect. 9 2
1000 18.80 precipitation 0.1 270 < th dose independent rect. 9 2