BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0748900 Os01g0748900|AK072413
(553 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G29690.1 | chr1:10379310-10381861 REVERSE LENGTH=562 679 0.0
AT4G24290.2 | chr4:12594856-12597815 FORWARD LENGTH=607 396 e-110
AT1G28380.1 | chr1:9963696-9966060 FORWARD LENGTH=613 368 e-102
AT1G14780.1 | chr1:5091020-5093873 FORWARD LENGTH=628 356 2e-98
>AT1G29690.1 | chr1:10379310-10381861 REVERSE LENGTH=562
Length = 561
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/558 (60%), Positives = 417/558 (74%), Gaps = 25/558 (4%)
Query: 6 SALEAALQAVGRGLDAAGDHRLLYCKGT--GRLLMLDESRARDLTINGG-VLRGVPPDVV 62
+ L A+QA+GRG D D RLLYCKG RL+ ++E + RDL ++ G +L VP D+
Sbjct: 19 TTLRNAIQALGRGFDVTSDVRLLYCKGAPGSRLVRIEEGQNRDLELSHGFLLPNVPADID 78
Query: 63 VEEGHGILERIRQVPGPPTDEPVVCSFPKMAECFNRKAGLLETTVPLGSFNSLFSFTGSW 122
G+ +RI VCSF +MAE FN ++G+ + +PLG FN++F++TGSW
Sbjct: 79 CSRGNSGTQRIS-----------VCSFHEMAEEFNVRSGV-KGNIPLGCFNAMFNYTGSW 126
Query: 123 KNDEAATKSLAIDGYSVPLFKVKITSGELFLHESVKRAIPHSWDPSALASFIENYGTHII 182
+ D A+TKSLA+ GY +PL+ VK+ L LH ++RA+P SWDP++LASFIENYGTHI+
Sbjct: 127 QVDAASTKSLALVGYFIPLYDVKLAKLTLVLHNEIRRAVPSSWDPASLASFIENYGTHIV 186
Query: 183 TSVTVGGKDEVYIKQHSSSQLSELEFRNYVKEIGSERFSDGDSKLNATPINYSEKDMTVI 242
TSVT+GG+D VYI+QH SS L E NYV ++ RF + +S+ P+ Y +KD+TVI
Sbjct: 187 TSVTIGGRDVVYIRQHQSSPLPVSEIENYVNDMIKHRFHEAESQSITGPLKYKDKDITVI 246
Query: 243 FRRRGGCDLVQNFNDWIKTVQSAPDVIGMTFLPIVSLVGDMPGKKHLARAIELYLKYKPQ 302
FRRRGG DL Q+ W +TV +APD+I MTF PIVSL+ +PG +HL RAIELYL+YKP
Sbjct: 247 FRRRGGDDLEQSHARWAETVPAAPDIINMTFTPIVSLLEGVPGLRHLTRAIELYLEYKPP 306
Query: 303 IEELQYFLDFQVQLVWAPVPPGIAGQHRKEPVCPSLQFSLMGPKLFVSTEQISVGRRPVT 362
IE+LQYFLD+Q+ WAP + RKEPVC SLQFSLMGPKLF+S +Q++VGR+PVT
Sbjct: 307 IEDLQYFLDYQIARAWAPEQSNL---QRKEPVCSSLQFSLMGPKLFISADQVTVGRKPVT 363
Query: 363 GLKLCLEGAKQNRLAIHLQHLGSLPKIFVPHWDSHITIGPPKWQGPEEQDSRWFEPIKWR 422
GL+L LEG+KQNRL+IHLQHL SLPKI PHWDSH+ IG PKWQGPEEQDSRWFEPIKW+
Sbjct: 364 GLRLSLEGSKQNRLSIHLQHLVSLPKILQPHWDSHVPIGAPKWQGPEEQDSRWFEPIKWK 423
Query: 423 NFAHVSTAPIEYTETSITDLSGVYIVTGAQLGVWDFGAKSVLHLKLLFSRVPGCTIRRSV 482
NF+HVST+PIE+TET I DLSGV+IVTGAQLGVWDFG+K+VLHLKLLFS+VPGCTIRRSV
Sbjct: 424 NFSHVSTSPIEHTETHIGDLSGVHIVTGAQLGVWDFGSKNVLHLKLLFSKVPGCTIRRSV 483
Query: 483 WDHSPSSSLVH-------RTDEASSSSSDNAKLVKIVDMTETLKGPQDAPGHWLVTGAKL 535
WDH+P +S + S + KL KIVD +E LKGPQD PGHWLVTGAKL
Sbjct: 484 WDHTPVASSGRLEPGGPSTSSSTEEVSGQSGKLAKIVDSSEMLKGPQDLPGHWLVTGAKL 543
Query: 536 GVEKGKIVVRAKYSLLNY 553
GVEKGKIV+R KYSLLNY
Sbjct: 544 GVEKGKIVLRVKYSLLNY 561
>AT4G24290.2 | chr4:12594856-12597815 FORWARD LENGTH=607
Length = 606
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 244/611 (39%), Positives = 347/611 (56%), Gaps = 89/611 (14%)
Query: 4 AGSALEAALQAVGRGLDAAGDHRLLYCKG---TGRLLMLDESRAR-DLTINGGV-LRGVP 58
A A E A+ ++G G D A D RL YCKG RLL + E ++ + GG+ + V
Sbjct: 7 ASKAAEVAIGSIGCGYDLAIDLRLKYCKGGSKDSRLLDIKEGDDNCEIVLPGGISIPNVS 66
Query: 59 PDVVVEEGHGILERIRQVPGPPTDEPVVCSFPKMAECFNRKAGLLETTVPLGSFNSLFSF 118
+ ++G + R +P F +MAE FN++ L +P G FN++F F
Sbjct: 67 KSIKCDKGERMRFRSDILP-----------FQQMAEQFNQELSL-AGKIPSGLFNAMFEF 114
Query: 119 TGSWKNDEAATKSLAIDGYSVPLFKVKITSGELFLHESVKRAIPHSWDPSALASFIENYG 178
+ W+ D A TK+LA DG + L+ V + ++ L E VK+A+P +WDP+ALA FI+ YG
Sbjct: 115 SSCWQKDAAYTKNLAFDGVFISLYSVALDKSQVLLREHVKQAVPSTWDPAALARFIDIYG 174
Query: 179 THIITSVTVGGKDEVYIKQHSSSQLSELEFRNYVKEIGSERFSD-------GDSKLNATP 231
THII SV +GGKD +Y KQ SS+L + + +KE+ +RF + G ++ A+
Sbjct: 175 THIIVSVKMGGKDVIYAKQQHSSKLQPEDLQKRLKEVADKRFVEASVVHNTGSERVQASS 234
Query: 232 I-----------------NYSEK-DMTVIFRRRGGCDLVQNF--NDWIKTVQSAPDVIGM 271
+Y+ K D + +RRGG D +N N+W++TVQ PDVI M
Sbjct: 235 KVETKEQRLRFADTSSLGSYANKEDYVFMCKRRGGND-NRNLMHNEWLQTVQMEPDVISM 293
Query: 272 TFLPIVSLVGDMPGKKHLARAIELYLKYKPQIEELQYFLDFQVQLVWAPVPPGIA-GQHR 330
+F+PI SL+ +PG L+ AI LYL+YKP IEEL FL+FQ+ WAPV + G R
Sbjct: 294 SFIPITSLLNGVPGSGFLSHAINLYLRYKPPIEELHQFLEFQLPRQWAPVFSELPLGPQR 353
Query: 331 KEPVCPSLQFSLMGPKLFVSTEQISVGRRPVTGLKLCLEGAKQNRLAIHLQHLGSLPKIF 390
K+ C SLQFS GPKL+V+T + VG+RP+TG++L LEG + NRLAIHLQHL SLPKI+
Sbjct: 354 KQQSCASLQFSFFGPKLYVNTTPVDVGKRPITGMRLYLEGRRSNRLAIHLQHLSSLPKIY 413
Query: 391 VPHWDSHITIGPPKWQGPEEQDSRWFEPIKWRNFAHVSTAPIEYTETSITDLSGVYIVTG 450
D + +I E D R++E + W+N++HV T P+E S DLS +VTG
Sbjct: 414 QLEDDLNRSI------RQESHDRRYYEKVNWKNYSHVCTEPVE----SDDDLS---VVTG 460
Query: 451 AQLGVWDFGAKSVLHLKLLFSRVPGCT-IRRSVWDH----SPSSSLVH------------ 493
AQL V G K+VL L+L FSRV G T ++ S WD +P S L+
Sbjct: 461 AQLHVESHGFKNVLFLRLCFSRVVGATLVKNSEWDEAVGFAPKSGLISTLISHHFTAAQK 520
Query: 494 ---RTDEASSSS----------SDNAKLVKIVDMTETLKGPQDAPGHWLVTGAKLGVEKG 540
R + + +S + KL+K VD +E +GPQ++PG+W+V+GA+L VEKG
Sbjct: 521 PPPRPADVNINSAIYPGGPPVPTQAPKLLKFVDTSEMTRGPQESPGYWVVSGARLLVEKG 580
Query: 541 KIVVRAKYSLL 551
KI ++ KYSL
Sbjct: 581 KISLKVKYSLF 591
>AT1G28380.1 | chr1:9963696-9966060 FORWARD LENGTH=613
Length = 612
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 230/615 (37%), Positives = 323/615 (52%), Gaps = 87/615 (14%)
Query: 4 AGSALEAALQAVGRGLDAAGDHRLLYCKGT---GRLLMLDESRARDLTINGG-VLRGVPP 59
A SA E A+ +G G D D R CK T RL+ +D +R RDL GG V+ V
Sbjct: 11 AHSAAEKAVSVIGLGYDLCSDVRFSACKTTPDGSRLVEIDPTRNRDLIFPGGIVVNNVSS 70
Query: 60 DVVVEEGHGILERIRQVPGPPTDEPVVCSFPKMAECFNRKAGLLETTVPLGSFNSLFSFT 119
+ ++G ER R + SF +M+E FN+ L +P G FN++F+F+
Sbjct: 71 SIKCDKG----ERTRL-------RSDILSFNQMSEKFNQDM-CLSGKIPSGMFNNMFAFS 118
Query: 120 GSWKNDEAATKSLAIDGYSVPLFKVKITSGELFLHESVKRAIPHSWDPSALASFIENYGT 179
W D ++ K+LA DG+ + L+ V+I +L L + VKR +P SWD +ALA FIE YGT
Sbjct: 119 KCWPKDASSVKTLAYDGWFISLYSVEIVRKQLTLRDEVKREVPSSWDSAALAGFIEKYGT 178
Query: 180 HIITSVTVGGKDEVYIKQHSSSQLSELEFRNYVKEIGSERFSD----------------- 222
H++ VT+GGKD +++KQ S E + +K G ERF
Sbjct: 179 HVVVGVTMGGKDVIHVKQMRKSNHEPEEIQKMLKHWGDERFCVDPVESKSPASVYSGKPK 238
Query: 223 ------------GDSKLNATPINYSEKDMTVIFRRRGGCDLVQNFNDWIKTVQSAPDVIG 270
G S +A ++ +++ + RRGG DL Q+ W+ TV AP+VI
Sbjct: 239 EENLLQWGLQPFGTSVSSAVVMHTKNEEIMRVCIRRGGVDLGQSHERWLSTVSQAPNVIS 298
Query: 271 MTFLPIVSLVGDMPGKKHLARAIELYLKYKPQIEELQYFLDFQVQLVWAPVPPGIA-GQH 329
M F+PI SL+ +PG L+ A+ LYL+YKP IEEL FL+FQ+ WAPV + G
Sbjct: 299 MCFVPITSLLSGLPGTGFLSHAVNLYLRYKPPIEELHQFLEFQLPRQWAPVYGDLPLGLR 358
Query: 330 RKEPVCPSLQFSLMGPKLFVSTEQISVGRRPVTGLKLCLEGAKQNRLAIHLQHLGSL-PK 388
R + PSLQFSLMGPKL+V+T ++ G RPVTGL+ LEG K N LAIHLQHL + P
Sbjct: 359 RSKQSSPSLQFSLMGPKLYVNTSKVDSGERPVTGLRFFLEGKKGNHLAIHLQHLSACPPS 418
Query: 389 IFVPHWDSHITIGPPKWQGPEEQDSRWFEPIKWRNFAHVSTAPIEYTETSITDLSGVYIV 448
+ + H D++ I P +G ++ P+KW F+HV T P++Y D + IV
Sbjct: 419 LHLSHDDTYEPIEEPVEKG-------YYVPVKWGIFSHVCTYPVQYNGARSDDTAS--IV 469
Query: 449 TGAQLGVWDFGAKSVLHLKLLFSRVPGCTIRRSVWDHSPSSS-----LVHRTDEASSSSS 503
T A L V G + VL L+L FS R+S WD+ ++S + S+ S
Sbjct: 470 TKAWLEVKGMGMRKVLFLRLGFSLDASAVTRKSCWDNLSTNSRKSGVFSMISTRLSTGLS 529
Query: 504 DN--------------------------AKLVKIVDMTETLKGPQDAPGHWLVTGAKLGV 537
N KL+ +VD E ++GP++ PG+W+VTGAKL V
Sbjct: 530 PNPATTKPQSKIDINSAVYPRGPSPPVKPKLLSLVDTKEVMRGPEEQPGYWVVTGAKLCV 589
Query: 538 EKGKIVVRAKYSLLN 552
E GKI ++AKYSLL
Sbjct: 590 EAGKISIKAKYSLLT 604
>AT1G14780.1 | chr1:5091020-5093873 FORWARD LENGTH=628
Length = 627
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 224/635 (35%), Positives = 332/635 (52%), Gaps = 106/635 (16%)
Query: 4 AGSALEAALQAVGRGLDAAGDHRLLYCK------GTGRLLMLDESRARDLTING-GVLRG 56
G +E A++++G+G D D RL YCK G RL++LD+++ R+L I G GV +
Sbjct: 5 GGDVIETAVKSLGKGFDLTADFRLKYCKDGDGSAGDDRLVVLDQTQNRELHIPGFGVFQN 64
Query: 57 VPPDVVVEEGHGILERIRQVPGPPTDEPVVCSFPKMAECFNRKAGLLETTVPLGSFNSLF 116
V D+ ++G ER R + F KM+E FN+++ + +P G+FN+ F
Sbjct: 65 VSADINCDKG----ERTRF-------RSDILDFNKMSEYFNQRSSV-TGKIPSGNFNATF 112
Query: 117 SF-TGSWKNDEAATKSLAIDGYSVPLFKVKITS-GELFLHESVKRAIPHSWDPSALASFI 174
F +GSW D A KSL +D V LF + I + L L + V+ A+P SWDP LA FI
Sbjct: 113 GFQSGSWATDAANVKSLGLDASVVTLFNLHIHNPNRLRLTDRVRNAVPSSWDPQLLARFI 172
Query: 175 ENYGTHIITSVTVGGKDEVYIKQHSSSQLSELEFRNYVKEIGSERFSDG----------- 223
E YGTH+IT V+VGG+D V ++Q SS L R+++ ++G + F+
Sbjct: 173 ERYGTHVITGVSVGGQDVVVVRQDKSSDLDNDLLRHHLYDLGDQLFTGSCLLSTRRLNKA 232
Query: 224 -----------------DSKLNATPINYS---EKDMTVIFRRRGGCDLVQNFNDWIKTVQ 263
D K N+S + +TVI +RGG ++ ++W+ TV
Sbjct: 233 YHHSHSQPKFPEAFNVFDDKQTVAFNNFSINSQNGITVICAKRGGDGRAKSHSEWLITVP 292
Query: 264 SAPDVIGMTFLPIVSLVGDMPGKKHLARAIELYLKYKPQIEELQYFLDFQVQLVWAPV-- 321
PD I F+PI SL+ D+PG L+ A+ LYL+YKP + +LQYFLDF WAPV
Sbjct: 293 DKPDAINFNFIPITSLLKDVPGSGLLSHAMSLYLRYKPPLMDLQYFLDFSGPRAWAPVHN 352
Query: 322 --PPGIAGQHRKEPVCPSLQFSLMGPKLFVSTEQISVGRRPVTGLKLCLEGAKQNRLAIH 379
P G A P+L + MGPKL+V+T ++ + PVTG++ LEG K NRLAIH
Sbjct: 353 DLPFGAAPN--MASAYPALHINFMGPKLYVNTTPVTSEKNPVTGMRFFLEGKKCNRLAIH 410
Query: 380 LQHL-GSLPKIFVPHWDSHITIGPPKWQGPEE--QDSRWFEPIKWRNFAHVSTAPIEYTE 436
LQHL + + D HI W+G ++ + R+FEP+ + F+HV T P++Y
Sbjct: 411 LQHLDNTRTTVGEKITDEHI------WRGSDQITDNDRYFEPLNGKKFSHVCTVPVKYDP 464
Query: 437 TSITDLSG-------VYIVTGAQLGVWDFGAKSVLHLKLLFSRVPGCTIRRSVWDHSP-- 487
I S +IVTGAQL V G+KSVLHL+L +++V + ++ W H P
Sbjct: 465 NWIKTTSNHKSQNDVAFIVTGAQLEVKKHGSKSVLHLRLRYTKVSDHYVVQNSWVHGPIG 524
Query: 488 ----------------SSSLVHRTDEASSSS--------------SDNAKLVKIVDMTET 517
S S+ H + + N K+VK VD+++
Sbjct: 525 TSQKSGIFSSMSMPLTSGSVHHNMIQKDKNEVVLDSGVFPGGPPVPANNKIVKFVDLSQL 584
Query: 518 LKGPQDAPGHWLVTGAKLGVEKGKIVVRAKYSLLN 552
+GPQ +PGHWLVTG +L ++KGK+ + K++LL+
Sbjct: 585 CRGPQHSPGHWLVTGVRLYLDKGKLCLHVKFALLH 619
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,661,587
Number of extensions: 560148
Number of successful extensions: 1297
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1274
Number of HSP's successfully gapped: 8
Length of query: 553
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 449
Effective length of database: 8,255,305
Effective search space: 3706631945
Effective search space used: 3706631945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)