Os01g0743400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tryptophanyl-tRNA synthetase (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0743400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Tryptophanyl-tRNA synthetase (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.09 | 0.388 | 11.3 | -0.735 | 0.317 | -0.759 | 0.0643 | 9.91 | -0.76 | 20.2 | 28.84 | 3650 | -- | -- |
| 68.64 | 0.386 | 11.6 | -2.49 | 0.289 | 0.55 | 0.229 | -- | -1.16 | 19.8 | 29.96 | 18151 | -- | -- |
| 68.1 | 0.384 | 11.3 | -0.716 | 0.317 | -0.784 | -- | 10.1 | -0.764 | 20.2 | 28.9 | 3643 | -- | -- |
| 68.34 | 0.385 | 11.6 | -2.5 | 0.282 | 0.617 | -- | -- | -1.2 | 20 | 30.8 | 18217 | -- | -- |
| 73.58 | 0.4 | 11.3 | -0.892 | -- | -0.644 | -- | 9.13 | -0.778 | -- | 28.92 | 3653 | -- | -- |
| 78.85 | 0.416 | 11.5 | -2.31 | 0.304 | -- | 0.158 | -- | -0.927 | 20.7 | -- | -- | -- | -- |
| 78.93 | 0.416 | 11.5 | -2.31 | 0.305 | -- | -- | -- | -0.927 | 20.6 | -- | -- | -- | -- |
| 73.03 | 0.398 | 11.6 | -2.53 | -- | 0.621 | -- | -- | -1.22 | -- | 30.8 | 18150 | -- | -- |
| 131.36 | 0.534 | 11.5 | -- | 0.327 | -1.24 | -- | -- | -0.778 | 20.2 | 35.32 | 47520 | -- | -- |
| 84.15 | 0.429 | 11.5 | -2.31 | -- | -- | -- | -- | -0.93 | -- | -- | -- | -- | -- |
| 219.66 | 0.693 | 11.4 | -- | 0.315 | -- | -- | -- | -0.67 | 20.1 | -- | -- | -- | -- |
| 137.22 | 0.546 | 11.5 | -- | -- | -1.23 | -- | -- | -0.785 | -- | 35.32 | 47520 | -- | -- |
| 225.11 | 0.7 | 11.4 | -- | -- | -- | -- | -- | -0.673 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.23 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 2 | 64.76 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 4 | 65.17 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 5 | 65.29 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 7 | 65.49 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 8 | 65.49 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 9 | 65.49 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 19 | 65.71 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 20 | 65.72 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 21 | 65.72 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 26 | 65.90 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 28 | 65.95 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 36 | 66.20 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 37 | 66.21 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 41 | 66.23 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 42 | 66.23 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 51 | 66.38 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 52 | 66.38 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 53 | 66.38 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 58 | 66.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 73 | 66.51 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 81 | 66.61 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 91 | 66.65 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 98 | 66.68 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 100 | 66.69 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 107 | 66.72 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 111 | 66.73 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 115 | 66.74 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 121 | 66.75 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 126 | 66.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 128 | 66.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 15 |
| 129 | 66.78 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 133 | 66.79 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 16 |
| 144 | 66.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 21 |
| 152 | 66.84 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 154 | 66.84 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 17 |
| 158 | 66.86 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 171 | 66.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 19 |
| 175 | 66.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 19 |
| 178 | 66.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 19 |
| 187 | 66.92 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 208 | 66.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 211 | 66.96 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 248 | 66.98 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 274 | 67.01 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 10 | 18 |
| 304 | 67.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 327 | 67.08 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 404 | 67.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 421 | 67.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 21 |
| 483 | 67.23 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 492 | 67.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 500 | 67.25 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 501 | 67.25 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 509 | 67.25 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 522 | 67.26 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 574 | 67.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 580 | 67.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 22 |
| 587 | 67.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 22 |
| 596 | 67.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 18 |
| 660 | 67.36 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 687 | 67.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 692 | 67.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 23 |
| 693 | 67.38 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 695 | 67.38 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 706 | 67.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 23 |
| 711 | 67.38 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 734 | 67.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 743 | 67.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 755 | 67.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 769 | 67.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 778 | 67.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 782 | 67.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 791 | 67.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 869 | 67.48 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 17 | 12 |
| 949 | 67.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 16 |
| 975 | 67.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 996 | 67.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 5 |