Os01g0741800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HAT dimerisation domain containing protein.
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Os01g0741800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HAT dimerisation domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.93 | 0.342 | 3.12 | -0.0617 | 0.129 | -0.107 | -0.051 | -0.616 | -0.018 | 7.8 | 1015 | 5176 | -- | -- |
| 54.22 | 0.343 | 3.11 | 0.132 | 0.126 | -0.167 | -0.0635 | -- | 0.0278 | 7.56 | 1014 | 7299 | -- | -- |
| 52.93 | 0.339 | 3.12 | -0.0628 | 0.129 | -0.107 | -- | -0.617 | -0.0179 | 7.79 | 1015 | 5176 | -- | -- |
| 53.71 | 0.341 | 3.1 | 0.148 | 0.13 | -0.187 | -- | -- | 0.0453 | 7.58 | 1014 | 13165 | -- | -- |
| 53.84 | 0.342 | 3.12 | -0.0608 | -- | -0.1 | -- | -0.622 | -0.0155 | -- | 1015 | 5175 | -- | -- |
| 55.52 | 0.349 | 3.12 | 0.0697 | 0.129 | -- | -0.0808 | -- | -0.00784 | 7.78 | -- | -- | -- | -- |
| 55.53 | 0.349 | 3.12 | 0.0676 | 0.129 | -- | -- | -- | -0.00775 | 7.77 | -- | -- | -- | -- |
| 54.61 | 0.344 | 3.11 | 0.15 | -- | -0.188 | -- | -- | 0.0477 | -- | 1014 | 13220 | -- | -- |
| 54.24 | 0.343 | 3.11 | -- | 0.131 | -0.158 | -- | -- | 0.0222 | 7.61 | 1014 | 14550 | -- | -- |
| 56.43 | 0.351 | 3.12 | 0.0692 | -- | -- | -- | -- | -0.00593 | -- | -- | -- | -- | -- |
| 55.65 | 0.349 | 3.12 | -- | 0.129 | -- | -- | -- | -0.0153 | 7.73 | -- | -- | -- | -- |
| 55.16 | 0.346 | 3.11 | -- | -- | -0.158 | -- | -- | 0.0239 | -- | 1014 | 14492 | -- | -- |
| 56.56 | 0.351 | 3.12 | -- | -- | -- | -- | -- | -0.0136 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.39 | temperature | 25 | 30 | > th | dose independent | rect. | 4 | 1 |
| 4 | 50.80 | temperature | 25 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 5 | 50.97 | wind | 1 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 7 | 51.10 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 9 | 51.22 | humidity | 90 | 10 | < th | dose independent | rect. | 4 | 1 |
| 12 | 51.54 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 9 |
| 14 | 51.55 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 7 |
| 25 | 51.77 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 22 |
| 28 | 51.83 | wind | 1 | 30 | < th | dose independent | rect. | 4 | 2 |
| 36 | 52.24 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 37 | 52.24 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 47 | 52.36 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 59 | 52.52 | wind | 1 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 66 | 52.60 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 68 | 52.61 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 75 | 52.68 | humidity | 50 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 76 | 52.68 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 84 | 52.74 | wind | 1 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 130 | 52.79 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 135 | 52.81 | wind | 1 | 30 | > th | dose independent | rect. | 4 | 1 |
| 148 | 52.83 | humidity | 50 | 14400 | > th | dose independent | sin | 17 | NA |
| 241 | 52.89 | humidity | 50 | 14400 | > th | dose independent | no | NA | NA |
| 370 | 52.91 | humidity | 50 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 381 | 52.93 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 456 | 52.95 | humidity | 80 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 463 | 52.96 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 476 | 52.97 | wind | 1 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 477 | 52.98 | humidity | 50 | 14400 | < th | dose independent | sin | 17 | NA |
| 500 | 52.98 | humidity | 60 | 14400 | < th | dose dependent | sin | 4 | NA |
| 508 | 52.99 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 7 |
| 519 | 53.00 | wind | 1 | 30 | < th | dose independent | rect. | 2 | 4 |
| 540 | 53.01 | humidity | 50 | 14400 | < th | dose independent | no | NA | NA |
| 709 | 53.03 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 718 | 53.04 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 726 | 53.05 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 751 | 53.06 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 755 | 53.06 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 10 | 5 |
| 786 | 53.06 | wind | 1 | 1440 | < th | dose dependent | rect. | 15 | 3 |
| 810 | 53.07 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 811 | 53.07 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 939 | 53.09 | humidity | 50 | 14400 | < th | dose dependent | sin | 14 | NA |
| 940 | 53.09 | humidity | 70 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 952 | 53.10 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 956 | 53.10 | wind | 1 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 957 | 53.10 | humidity | 70 | 14400 | > th | dose independent | rect. | 21 | 12 |
| 960 | 53.10 | atmosphere | 1015 | 14400 | > th | dose dependent | sin | 18 | NA |
| 975 | 53.11 | humidity | 70 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 979 | 53.11 | humidity | 70 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 987 | 53.11 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 10 | 1 |