Os01g0738600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ENTH/VHS domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0738600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : ENTH/VHS domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.74 | 0.39 | 7.13 | 0.751 | 0.624 | -1.15 | 0.563 | -0.837 | -0.298 | 11.5 | 24.41 | 848 | -- | -- |
| 69.59 | 0.389 | 7.14 | 0.639 | 0.629 | -1.04 | 0.392 | -- | -0.323 | 11.4 | 24.76 | 859 | -- | -- |
| 69.9 | 0.389 | 7.13 | 0.711 | 0.618 | -1.12 | -- | -0.475 | -0.306 | 11.4 | 24.38 | 858 | -- | -- |
| 70.2 | 0.39 | 7.15 | 0.633 | 0.619 | -1.06 | -- | -- | -0.325 | 11.4 | 24.5 | 858 | -- | -- |
| 85.09 | 0.432 | 7.13 | 0.889 | -- | -0.995 | -- | -1.22 | -0.235 | -- | 24.38 | 858 | -- | -- |
| 85.53 | 0.434 | 7.1 | 0.917 | 0.482 | -- | 0.458 | -- | -0.114 | 11.7 | -- | -- | -- | -- |
| 86.41 | 0.435 | 7.1 | 0.935 | 0.481 | -- | -- | -- | -0.113 | 11.4 | -- | -- | -- | -- |
| 79.32 | 0.417 | 7.16 | 0.687 | -- | -1.03 | -- | -- | -0.329 | -- | 28.1 | 1599 | -- | -- |
| 77.4 | 0.41 | 7.16 | -- | 0.515 | -1.18 | -- | -- | -0.435 | 11.7 | 23.62 | 3881 | -- | -- |
| 100.92 | 0.469 | 7.11 | 0.922 | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
| 109.43 | 0.489 | 7.12 | -- | 0.471 | -- | -- | -- | -0.217 | 11.3 | -- | -- | -- | -- |
| 90.99 | 0.446 | 7.18 | -- | -- | -1.22 | -- | -- | -0.44 | -- | 28.1 | 1599 | -- | -- |
| 123.34 | 0.518 | 7.13 | -- | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 12 | 65.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 30 | 66.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 35 | 66.16 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 49 | 66.42 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 65 | 66.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 77 | 66.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 81 | 67.05 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 101 | 67.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 105 | 67.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 13 |
| 115 | 67.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 13 |
| 132 | 67.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 135 | 67.67 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 138 | 67.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 17 |
| 144 | 67.75 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 175 | 67.93 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 3 |
| 197 | 68.07 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 227 | 68.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 254 | 68.36 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 21 |
| 282 | 68.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 352 | 68.70 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 355 | 68.70 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 402 | 68.85 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 430 | 68.93 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 5 |
| 431 | 68.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 5 |
| 455 | 68.98 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 3 |
| 503 | 69.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 719 | 69.28 | temperature | 25 | 4320 | < th | dose dependent | rect. | 12 | 19 |
| 735 | 69.31 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 815 | 69.41 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |
| 918 | 69.52 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 928 | 69.53 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 938 | 69.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |